Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR8065-201ENST00000620577 100 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RCCD1A6NED2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RCCD1A6NED2 MIR519C-201ENST00000385053 87 ntBASIC3.29□□□□□ -1.88
RCCD1A6NED2 AC093729.1-201ENST00000513074 128 ntBASIC3.29□□□□□ -1.88
RCCD1A6NED2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
RCCD1A6NED2 Z97988.1-201ENST00000637697 135 ntBASIC3.29□□□□□ -1.88
RCCD1A6NED2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RCCD1A6NED2 AC005336.3-201ENST00000623833 2679 ntBASIC3.29□□□□□ -1.88
RCCD1A6NED2 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 SNORD115-27-201ENST00000364430 82 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 RNU6-524P-201ENST00000384270 107 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 SNORA11.1-201ENST00000408133 129 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 RPL31P63-201ENST00000422565 375 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 RNA5SP137-201ENST00000516833 135 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 SNORA74.3-201ENST00000517108 154 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 FAM106DP-201ENST00000586416 501 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 AC007179.3-201ENST00000604976 235 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 AC007318.2-201ENST00000620999 243 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RCCD1A6NED2 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
RCCD1A6NED2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RCCD1A6NED2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
RCCD1A6NED2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
RCCD1A6NED2 Y_RNA.98-201ENST00000363109 102 ntBASIC3.27□□□□□ -1.89
RCCD1A6NED2 SNORD67-201ENST00000390833 111 ntBASIC3.27□□□□□ -1.89
RCCD1A6NED2 RNU6-1321P-201ENST00000390905 107 ntBASIC3.27□□□□□ -1.89
RCCD1A6NED2 AC092427.1-202ENST00000430569 476 ntBASIC3.27□□□□□ -1.89
RCCD1A6NED2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.27□□□□□ -1.89
RCCD1A6NED2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RCCD1A6NED2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RCCD1A6NED2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RCCD1A6NED2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RCCD1A6NED2 SNORD115-37-201ENST00000363768 82 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 Y_RNA.173-201ENST00000363776 113 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNU1-148P-201ENST00000384472 162 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNA5SP465-201ENST00000391195 109 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNU6-613P-201ENST00000410412 108 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNU6-602P-201ENST00000411155 105 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 ARF4P2-201ENST00000430209 526 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 AC234781.5-201ENST00000508429 271 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNVU1-2-201ENST00000516326 135 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNU7-137P-201ENST00000516788 62 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNA5SP481-201ENST00000516814 122 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 RNA5SP437-201ENST00000517249 129 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.26□□□□□ -1.89
RCCD1A6NED2 AL513043.2-201ENST00000573941 143 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 MIR4712-201ENST00000583750 82 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 AC012676.2-201ENST00000619258 186 ntBASIC3.26□□□□□ -1.89
RCCD1A6NED2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RCCD1A6NED2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RCCD1A6NED2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RCCD1A6NED2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RCCD1A6NED2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RCCD1A6NED2 RNA5SP138-201ENST00000365098 114 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 RNU6-480P-201ENST00000384332 107 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 RNU6-788P-201ENST00000390967 104 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 RNU7-48P-201ENST00000458875 63 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 RN7SL633P-201ENST00000488974 297 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 MTND5P40-201ENST00000559945 246 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 AC105081.1-201ENST00000617727 106 ntBASIC3.25□□□□□ -1.89
RCCD1A6NED2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RCCD1A6NED2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RCCD1A6NED2 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 SNORA48.1-201ENST00000390879 135 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 MIR889-201ENST00000401280 79 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 MIR1283-2-201ENST00000408621 87 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 HMGN2P3-201ENST00000433603 273 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 HMGN2P5-201ENST00000436882 273 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 snoU13.27-201ENST00000459278 104 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 RN7SKP132-201ENST00000516001 208 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 RNU7-43P-201ENST00000516554 64 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 SUB1P4-201ENST00000566062 339 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
RCCD1A6NED2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
RCCD1A6NED2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RCCD1A6NED2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RCCD1A6NED2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
RCCD1A6NED2 AL023284.1-201ENST00000403956 276 ntBASIC3.23□□□□□ -1.89
RCCD1A6NED2 RN7SKP220-201ENST00000410611 288 ntBASIC3.23□□□□□ -1.89
RCCD1A6NED2 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
RCCD1A6NED2 CYP3A52P-201ENST00000563326 91 ntBASIC3.23□□□□□ -1.89
RCCD1A6NED2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RCCD1A6NED2 MIR424-201ENST00000362227 98 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 MIR181B2-201ENST00000385004 89 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 RPL23AP83-201ENST00000434984 473 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 AC099513.1-201ENST00000490423 301 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 RN7SKP57-201ENST00000517248 293 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 SNORD14A-201ENST00000606526 91 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.22□□□□□ -1.89
RCCD1A6NED2 AC008133.2-201ENST00000624540 351 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 AP001362.1-201ENST00000625165 124 ntBASIC3.22□□□□□ -1.89
RCCD1A6NED2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
RCCD1A6NED2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RCCD1A6NED2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms