Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-721P-201ENST00000410155 105 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 SNORA27.4-201ENST00000516650 95 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 AC091931.1-201ENST00000623488 728 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNY1P13-201ENST00000365030 105 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 MIR539-201ENST00000365690 78 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-900P-201ENST00000384498 102 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 AL603914.1-201ENST00000401964 204 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 AL590004.1-201ENST00000405321 300 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 MTND2P14-201ENST00000482139 351 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-155P-201ENST00000516347 100 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 MTCO2P4-201ENST00000517968 247 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 DEFB131E-201ENST00000532329 154 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 MIR4473-201ENST00000583731 91 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 AC022441.3-201ENST00000605737 136 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 AC122108.2-201ENST00000611946 526 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 MIR548AY-201ENST00000617669 107 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 uc_338.10-201ENST00000621872 182 ntBASIC-1.26□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 SNORD114-25-201ENST00000363742 72 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 MIR635-201ENST00000384830 98 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 SNORA40.4-201ENST00000390971 128 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 RNU2-31P-201ENST00000516954 155 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 MRPS36P3-201ENST00000519284 130 ntBASIC-1.27□□□□□ -2.61
TCRBV3S1A0A5B6 FGF7P2-201ENST00000332473 296 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNU1-141P-201ENST00000364623 158 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-842P-201ENST00000384269 107 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-710P-201ENST00000410424 105 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNA5SP25-201ENST00000410815 110 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 MTND2P9-201ENST00000422293 931 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 SPINT5P-201ENST00000448174 155 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 AL500527.2-201ENST00000454105 95 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 SNORA13-201ENST00000458790 133 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-89P-201ENST00000606519 100 ntBASIC-1.28□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD114-29-201ENST00000364819 70 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-9-201ENST00000384000 95 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-3-201ENST00000384287 95 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-8-201ENST00000384365 95 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-7-201ENST00000384404 95 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-5-201ENST00000384462 95 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MIR548A2-201ENST00000384956 97 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MIR7-2-201ENST00000384970 110 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MIR626-201ENST00000385032 94 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3920-201ENST00000581751 86 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3672-201ENST00000584290 82 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 AC087752.4-201ENST00000605911 462 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 AC097520.1-201ENST00000624435 385 ntBASIC-1.29□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 SNORA36B-201ENST00000410438 131 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 AC074085.1-201ENST00000413598 418 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 AC091951.2-201ENST00000500762 203 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-470P-201ENST00000515954 104 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 RNU7-149P-201ENST00000516739 59 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 ZNF519P2-201ENST00000557032 169 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 AL080274.1-201ENST00000605565 220 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 AC005014.2-201ENST00000607795 599 ntBASIC-1.3□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNA5SP133-201ENST00000363368 119 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD115-44-201ENST00000365391 82 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-831P-201ENST00000384548 107 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-901P-201ENST00000384593 106 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 MTND1P14-201ENST00000427400 950 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 AC060788.1-201ENST00000521318 469 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 AC024933.1-201ENST00000608472 348 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 MTND5P18-201ENST00000445624 1801 ntBASIC-1.31□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-502P-201ENST00000362419 108 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-648P-201ENST00000410190 107 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNA5SP261-201ENST00000410536 106 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 AC098826.2-201ENST00000452011 651 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNU7-66P-201ENST00000459469 62 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 AC083798.1-201ENST00000472671 131 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-693P-201ENST00000516134 107 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-256P-201ENST00000516747 97 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-835P-201ENST00000516974 104 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms