Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 MIRLET7C-201ENST00000362160 84 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 Y_RNA.351-201ENST00000365436 96 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 Y_RNA.440-201ENST00000384120 114 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 MIR518A2-201ENST00000384966 87 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 MIR1283-2-201ENST00000408621 87 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 RPS26P48-201ENST00000491713 339 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 RNVU1-2-201ENST00000516326 135 ntBASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNCAIPQ9Y6H5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 MIR21-201ENST00000362134 72 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 RNU1-133P-201ENST00000364867 167 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 SNORA4.2-201ENST00000365313 147 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-147P-201ENST00000383983 107 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 U8.16-201ENST00000391279 133 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 RNU2-7P-201ENST00000410794 178 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 AC087499.4-201ENST00000448505 178 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 AL353997.5-201ENST00000618886 171 ntBASIC2.63□□□□□ -1.99
SNCAIPQ9Y6H5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 MIR342-201ENST00000362212 99 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-950P-201ENST00000384651 107 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP465-201ENST00000391195 109 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 RNU7-12P-201ENST00000516030 62 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP168-201ENST00000516642 112 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 MIR3613-201ENST00000579844 87 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 MIR6766-201ENST00000622641 72 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 AC027279.3-201ENST00000625055 122 ntBASIC2.62□□□□□ -1.99
SNCAIPQ9Y6H5 AL596211.1-201ENST00000569873 2277 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-349P-201ENST00000362402 107 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 HMGN2P39-201ENST00000398005 273 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 SNX2P2-201ENST00000424553 323 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 AC015922.2-201ENST00000435593 184 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 COX6CP6-201ENST00000490840 228 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 AC007012.1-201ENST00000567192 175 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 SNORD14A-201ENST00000606526 91 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 MIR219B-201ENST00000637023 88 ntBASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SNCAIPQ9Y6H5 SNORA63D-201ENST00000364359 132 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 MIR570-201ENST00000384917 97 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 U8.17-201ENST00000391292 132 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 RNU7-80P-201ENST00000459562 61 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 MIR4679-2-201ENST00000578358 77 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 AC002984.1-201ENST00000591692 448 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 AC078899.2-201ENST00000595282 212 ntBASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.6□□□□□ -1.99
SNCAIPQ9Y6H5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNY1P6-201ENST00000384193 109 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-424P-201ENST00000384367 105 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 MIR520A-201ENST00000384862 85 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RPL23AP42-201ENST00000471152 471 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP458-201ENST00000516188 119 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-412P-201ENST00000516434 106 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNY4P20-201ENST00000516678 93 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 MIR4778-201ENST00000577635 80 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 AC021443.1-201ENST00000604478 211 ntBASIC2.59□□□□□ -1.99
SNCAIPQ9Y6H5 RNU6-833P-201ENST00000363486 107 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 U8.13-201ENST00000390842 128 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 SNORA48.1-201ENST00000390879 135 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 AL627390.1-201ENST00000396055 340 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 AC091932.4-201ENST00000623386 200 ntBASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
SNCAIPQ9Y6H5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 Y_RNA.116-201ENST00000363292 103 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 MIR759-201ENST00000390224 91 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 RNA5SP501-201ENST00000410990 112 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 RNU7-34P-201ENST00000459394 64 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 RPL23AP63-201ENST00000498752 471 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 Y_RNA.676-201ENST00000516393 96 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
SNCAIPQ9Y6H5 Y_RNA.198-201ENST00000364013 98 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 SNORA27-201ENST00000384323 126 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 Y_RNA.549-201ENST00000384657 102 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 AL031737.1-201ENST00000450125 223 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 AC093850.1-201ENST00000454121 251 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 RNU7-164P-201ENST00000459221 62 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 RNU7-181P-201ENST00000517234 74 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 SUMO2P16-201ENST00000519475 264 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 SUB1P4-201ENST00000566062 339 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 HSPE1P19-201ENST00000603327 295 ntBASIC2.56□□□□□ -2
SNCAIPQ9Y6H5 uc_338.28-201ENST00000612082 187 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms