Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.71□□□□□ -1.98
GTF3C3Q9Y5Q9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.71□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORD116-18-201ENST00000383961 92 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU6-804P-201ENST00000384286 107 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORA48.3-201ENST00000391081 134 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU6-938P-201ENST00000411285 103 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORD36C-201ENST00000516733 66 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU7-70P-201ENST00000516941 66 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 MIR5197-201ENST00000583721 112 ntBASIC2.7□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU6-151P-201ENST00000364158 107 ntBASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 RPS27P16-201ENST00000425758 201 ntBASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 RPL23AP83-201ENST00000434984 473 ntBASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 UBL5P3-201ENST00000475112 231 ntBASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
GTF3C3Q9Y5Q9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 MIR513C-201ENST00000401352 84 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU7-67P-201ENST00000459003 62 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 AC090821.2-201ENST00000523552 176 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 AC131055.1-201ENST00000584626 316 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 AC008133.2-201ENST00000624540 351 ntBASIC2.68□□□□□ -1.98
GTF3C3Q9Y5Q9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORA51.10-201ENST00000384418 136 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORD28B-201ENST00000390993 75 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 SNORA11.1-201ENST00000408133 129 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU6-588P-201ENST00000410281 105 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU7-96P-201ENST00000459535 64 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RPS29P24-201ENST00000486345 171 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 AL133373.1-201ENST00000497098 94 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RNA5SP200-201ENST00000516360 103 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RN7SKP88-201ENST00000516847 250 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 AC112693.2-201ENST00000556538 232 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 MIR3122-201ENST00000577243 73 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 MIR4791-201ENST00000607666 84 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 7SK.8-201ENST00000612110 250 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 7SK.11-201ENST00000615477 250 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 AC243994.1-201ENST00000618627 109 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 7SK.13-201ENST00000622040 250 ntBASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
GTF3C3Q9Y5Q9 RNA5SP48-201ENST00000363969 126 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 RPS29P29-201ENST00000456396 171 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU2-13P-201ENST00000515909 113 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 RNU7-53P-201ENST00000516705 60 ntBASIC2.66□□□□□ -1.98
GTF3C3Q9Y5Q9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.65□□□□□ -1.99
GTF3C3Q9Y5Q9 SNORD18B-201ENST00000365659 72 ntBASIC2.65□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6-1062P-201ENST00000383908 107 ntBASIC2.65□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR5089-201ENST00000580047 84 ntBASIC2.65□□□□□ -1.99
GTF3C3Q9Y5Q9 AC021753.1-201ENST00000635724 168 ntBASIC2.65□□□□□ -1.99
GTF3C3Q9Y5Q9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 Y_RNA.400-201ENST00000383963 111 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 AL035398.1-201ENST00000430869 322 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 MTATP6P21-201ENST00000440681 189 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 AC074050.1-201ENST00000563247 211 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR8065-201ENST00000620577 100 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.64□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU4-11P-201ENST00000365287 132 ntBASIC2.63□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6-1130P-201ENST00000365434 107 ntBASIC2.63□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR3658-201ENST00000636291 56 ntBASIC2.63□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR302B-201ENST00000362188 73 ntBASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 RNA5SP363-201ENST00000365072 115 ntBASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 snoU13.16-201ENST00000459350 104 ntBASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 AP001485.1-201ENST00000604799 199 ntBASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR4251-201ENST00000635819 61 ntBASIC2.62□□□□□ -1.99
GTF3C3Q9Y5Q9 SNORD48-201ENST00000364953 64 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 SNORA24-201ENST00000384096 131 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6-958P-201ENST00000516995 106 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR548X2-201ENST00000579776 100 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 AC006386.2-201ENST00000624491 75 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 AC012005.1-201ENST00000624575 75 ntBASIC2.61□□□□□ -1.99
GTF3C3Q9Y5Q9 GTF3AP2-201ENST00000557014 266 ntBASIC2.6□□□□□ -1.99
GTF3C3Q9Y5Q9 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
GTF3C3Q9Y5Q9 AL096861.1-201ENST00000610899 123 ntBASIC2.6□□□□□ -1.99
GTF3C3Q9Y5Q9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
GTF3C3Q9Y5Q9 MIR483-201ENST00000385070 76 ntBASIC2.59□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU6-998P-201ENST00000515894 101 ntBASIC2.59□□□□□ -1.99
GTF3C3Q9Y5Q9 RNU7-41P-201ENST00000515917 61 ntBASIC2.59□□□□□ -1.99
GTF3C3Q9Y5Q9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.59□□□□□ -1.99
GTF3C3Q9Y5Q9 Y_RNA.170-201ENST00000363746 110 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 RNY1P5-201ENST00000383890 115 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 MIR570-201ENST00000384917 97 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 RNU7-200P-201ENST00000516105 62 ntBASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
GTF3C3Q9Y5Q9 CYP3A52P-201ENST00000563326 91 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms