Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-309P-201ENST00000364573 106 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 AC008267.6-201ENST00000441664 139 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 RNU7-80P-201ENST00000459562 61 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 AC107297.1-201ENST00000459991 176 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 UBE2DNL-203ENST00000474922 222 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-479P-201ENST00000516348 105 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 RNA5SP200-201ENST00000516360 103 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 RNU6-113P-201ENST00000516653 101 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA18.7-201ENST00000516910 131 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 SUMO2P16-201ENST00000519475 264 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 SNORA77B-201ENST00000578179 125 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
PCDHA9Q9Y5H5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 MIR449A-201ENST00000362113 91 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.71-201ENST00000362892 104 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.218-201ENST00000364218 104 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.280-201ENST00000364765 112 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 SNORA27-201ENST00000384323 126 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-1081P-201ENST00000384537 107 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 MIR653-201ENST00000385279 96 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 AL356379.1-201ENST00000414105 126 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 AC079804.2-201ENST00000490376 200 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 RPS26P48-201ENST00000491713 339 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 RNU7-181P-201ENST00000517234 74 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 DEFB122-202ENST00000569013 197 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 FAM106DP-201ENST00000586416 501 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 AL022345.2-201ENST00000606307 135 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
PCDHA9Q9Y5H5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 MIR23A-201ENST00000385245 73 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD123-201ENST00000459473 70 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
PCDHA9Q9Y5H5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.114-201ENST00000363265 113 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.127-201ENST00000363386 109 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-647P-201ENST00000364243 107 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.351-201ENST00000365436 96 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD116-14-201ENST00000383894 92 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD116-17-201ENST00000383929 92 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-301P-201ENST00000384277 107 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD116-15-201ENST00000384445 92 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 SNORD116-19-201ENST00000384729 92 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 AL158147.1-201ENST00000443970 75 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.651-201ENST00000459380 103 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 AC025033.1-201ENST00000463883 194 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-322P-201ENST00000516010 103 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNU7-70P-201ENST00000516941 66 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 AC090049.2-201ENST00000550377 109 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 MIR548AI-201ENST00000579940 88 ntBASIC2.06□□□□□ -2.08
PCDHA9Q9Y5H5 RNA5SP160-201ENST00000364866 120 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.291-201ENST00000364886 113 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 Y_RNA.500-201ENST00000384466 111 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-1168P-201ENST00000390831 104 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 RNU2-51P-201ENST00000410708 197 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 RNU7-96P-201ENST00000459535 64 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 SNORA44.1-201ENST00000517031 108 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 AC015688.6-201ENST00000577737 104 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 AC106754.2-201ENST00000623006 233 ntBASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDHA9Q9Y5H5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNA5SP259-201ENST00000365541 109 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RPS29P24-201ENST00000486345 171 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RPS27P21-201ENST00000486977 252 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNU2-13P-201ENST00000515909 113 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RN7SKP179-201ENST00000516126 217 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-313P-201ENST00000516317 112 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNU1-40P-201ENST00000516816 164 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNU1-97P-201ENST00000516872 164 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 RNU6-1234P-201ENST00000516877 103 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 AC090821.2-201ENST00000523552 176 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.04□□□□□ -2.08
PCDHA9Q9Y5H5 AL365222.1-201ENST00000614661 98 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms