Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
KDM3AQ9Y4C1 RNU4-10P-201ENST00000364383 140 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 RNU6-472P-201ENST00000384299 107 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 MIR626-201ENST00000385032 94 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 MTCYBP9-201ENST00000431021 303 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 SNRPGP14-201ENST00000435400 219 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 AC245047.8-201ENST00000456455 284 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 RN7SKP164-201ENST00000516138 266 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 MIR6734-201ENST00000621166 68 ntBASIC1.24□□□□□ -2.21
KDM3AQ9Y4C1 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 SNORA26-201ENST00000391286 122 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 SNORD2.1-201ENST00000458762 69 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 SNORD77.4-201ENST00000516158 81 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
KDM3AQ9Y4C1 RNY1-201ENST00000364228 113 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 Y_RNA.518-201ENST00000384552 113 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 AC107297.1-201ENST00000459991 176 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 AC100767.1-201ENST00000528178 123 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 MIR3192-201ENST00000584920 77 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 AC012433.1-201ENST00000588916 398 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 AL391903.3-201ENST00000612158 163 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
KDM3AQ9Y4C1 Y_RNA.229-201ENST00000364347 113 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 MIR548O-201ENST00000408583 114 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 AL118496.2-201ENST00000448300 230 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-365P-201ENST00000517113 106 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
KDM3AQ9Y4C1 MIR103A2-201ENST00000362154 78 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.133-201ENST00000363428 110 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RNY3P5-201ENST00000384127 102 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RNU2-38P-201ENST00000410856 79 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 SNORD127-201ENST00000458892 86 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RNU7-41P-201ENST00000515917 61 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RNA5SP480-201ENST00000516840 109 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 MIR548AR-201ENST00000582191 57 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 MIR4251-201ENST00000635819 61 ntBASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
KDM3AQ9Y4C1 RNA5SP264-201ENST00000363115 107 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.277-201ENST00000364754 102 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 MIR4282-201ENST00000583613 67 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 AL353621.2-201ENST00000605340 133 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 AL365265.1-201ENST00000621045 234 ntBASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU2-70P-201ENST00000410718 179 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-651P-201ENST00000411040 105 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU2-55P-201ENST00000411146 174 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-1132P-201ENST00000459214 107 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU7-25P-201ENST00000516544 62 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 U4.1-201ENST00000620349 87 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 AC068700.1-201ENST00000565862 3754 ntBASIC1.18□□□□□ -2.22
KDM3AQ9Y4C1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 SNORA51.10-201ENST00000384418 136 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-847P-201ENST00000411115 108 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 MTND3P2-201ENST00000438452 342 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 RNU7-90P-201ENST00000459216 62 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 RNU6-504P-201ENST00000516568 104 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 AL442067.1-201ENST00000613261 223 ntBASIC1.17□□□□□ -2.22
KDM3AQ9Y4C1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms