Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RNU7-70P-201ENST00000516941 66 ntBASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SIT1Q9Y3P8 RNU1-133P-201ENST00000364867 167 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.309-201ENST00000365046 111 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 SNORA26.9-201ENST00000391322 122 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 AC015922.2-201ENST00000435593 184 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 RNU6-1116P-201ENST00000517269 99 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 AC007012.1-201ENST00000567192 175 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 MIR4778-201ENST00000577635 80 ntBASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.31□□□□□ -2.04
SIT1Q9Y3P8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 RNU6-1298P-201ENST00000362456 101 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 RNU6-690P-201ENST00000365242 106 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 RNU6-1031P-201ENST00000384773 107 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 MIR520A-201ENST00000384862 85 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 U8.16-201ENST00000391279 133 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 AC108729.3-201ENST00000513484 108 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 RNVU1-2-201ENST00000516326 135 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 SNORA18.7-201ENST00000516910 131 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 AC091932.4-201ENST00000623386 200 ntBASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.3□□□□□ -2.04
SIT1Q9Y3P8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-34-201ENST00000362441 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-12-201ENST00000362583 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-29-201ENST00000362834 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-9-201ENST00000362912 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-21-201ENST00000362963 81 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.85-201ENST00000363014 111 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-14-201ENST00000363090 81 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-13-201ENST00000363358 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-41-201ENST00000363608 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-11-201ENST00000363616 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-5-201ENST00000363633 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-39-201ENST00000363694 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-4-201ENST00000363810 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-16-201ENST00000363887 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-6-201ENST00000363942 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-42-201ENST00000364273 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-15-201ENST00000364809 81 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-1-201ENST00000364961 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-26-201ENST00000365067 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-10-201ENST00000365073 81 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.351-201ENST00000365436 96 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-43-201ENST00000365503 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-36-201ENST00000365629 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 MIR221-201ENST00000385135 110 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 RNA5SP168-201ENST00000516642 112 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 MIR3683-201ENST00000580847 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 AC002984.1-201ENST00000591692 448 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SNORD115-40-201ENST00000606510 82 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 AC008555.8-201ENST00000623602 2168 ntBASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
SIT1Q9Y3P8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 RNU6-112P-201ENST00000363599 104 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.213-201ENST00000364178 111 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.226-201ENST00000364337 114 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.298-201ENST00000364960 107 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 SNORA27-201ENST00000384323 126 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 U8.13-201ENST00000390842 128 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 RNY4P20-201ENST00000516678 93 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.28□□□□□ -2.04
SIT1Q9Y3P8 Y_RNA.116-201ENST00000363292 103 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNY4P6-201ENST00000363667 96 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNU6-1107P-201ENST00000364817 104 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 SNORA4.2-201ENST00000365313 147 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNU6-106P-201ENST00000384405 107 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNU6-998P-201ENST00000515894 101 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNU6-1053P-201ENST00000515930 101 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RNA5SP481-201ENST00000516814 122 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 AC021443.1-201ENST00000604478 211 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 MIR7111-201ENST00000619751 72 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 AL513423.1-201ENST00000621695 132 ntBASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SIT1Q9Y3P8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 Y_RNA.43-201ENST00000362670 111 ntBASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 SNORA25.6-201ENST00000364121 118 ntBASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 RNU1-51P-201ENST00000365345 176 ntBASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 MIR452-201ENST00000385020 85 ntBASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 SNORD12C-201ENST00000386307 89 ntBASIC2.26□□□□□ -2.05
SIT1Q9Y3P8 AL023284.1-201ENST00000403956 276 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 401.1 ms