Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MIR3683-201ENST00000580847 82 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 MIR4305-201ENST00000583252 102 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 AL353997.5-201ENST00000618886 171 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 AC091932.4-201ENST00000623386 200 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 MAPK10-266ENST00000641066 6555 ntBASIC2.99□□□□□ -1.93
RTCBQ9Y3I0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 AL596211.1-201ENST00000569873 2277 ntBASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 RNU7-123P-201ENST00000515911 60 ntBASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 AC002984.1-201ENST00000591692 448 ntBASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 AC027279.3-201ENST00000625055 122 ntBASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTCBQ9Y3I0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 SNORA51.10-201ENST00000384418 136 ntBASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 MIR1302-4-201ENST00000408701 150 ntBASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 Y_RNA.676-201ENST00000516393 96 ntBASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 AC084364.2-201ENST00000546924 395 ntBASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 AC069114.2-201ENST00000604699 304 ntBASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
RTCBQ9Y3I0 MIRLET7C-201ENST00000362160 84 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 MIR548D2-201ENST00000384955 97 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 HMGN2P23-201ENST00000456759 269 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 MIR3163-201ENST00000581592 73 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 MIR5007-201ENST00000583098 95 ntBASIC2.96□□□□□ -1.94
RTCBQ9Y3I0 AC069257.2-201ENST00000441819 155 ntBASIC2.95□□□□□ -1.94
RTCBQ9Y3I0 RNU6-970P-201ENST00000516312 107 ntBASIC2.95□□□□□ -1.94
RTCBQ9Y3I0 AC078899.2-201ENST00000595282 212 ntBASIC2.95□□□□□ -1.94
RTCBQ9Y3I0 AC022202.1-201ENST00000613515 211 ntBASIC2.95□□□□□ -1.94
RTCBQ9Y3I0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTCBQ9Y3I0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 MIR342-201ENST00000362212 99 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 RNU1-109P-201ENST00000383960 147 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 SNORA27-201ENST00000384323 126 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 SNORA64-201ENST00000384674 134 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 SNX2P2-201ENST00000424553 323 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 RNA5SP458-201ENST00000516188 119 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 RNU2-35P-201ENST00000516446 142 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 SNORA31.10-201ENST00000516482 106 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 AC022523.2-201ENST00000561045 150 ntBASIC2.94□□□□□ -1.94
RTCBQ9Y3I0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 Y_RNA.78-201ENST00000362970 110 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 Y_RNA.241-201ENST00000364470 117 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 RNU6-294P-201ENST00000364999 102 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 RNU6-424P-201ENST00000384367 105 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 RN7SKP200-201ENST00000410564 320 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 AL035398.1-201ENST00000430869 322 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 RPL23AP42-201ENST00000471152 471 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 HSPE1P19-201ENST00000603327 295 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 AC067747.1-201ENST00000608026 250 ntBASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.93□□□□□ -1.94
RTCBQ9Y3I0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 SNORA25.6-201ENST00000364121 118 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 RNU6-1131P-201ENST00000364955 107 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 MIR590-201ENST00000385008 97 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 BX510359.4-201ENST00000423750 193 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 AC015922.2-201ENST00000435593 184 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 RNU7-96P-201ENST00000459535 64 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 MIR3126-201ENST00000577443 74 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 MIR5094-201ENST00000578766 85 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 Y_RNA.818-201ENST00000618813 71 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 AL442644.1-201ENST00000454390 3105 ntBASIC2.92□□□□□ -1.94
RTCBQ9Y3I0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 AC092881.1-201ENST00000638218 2733 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-34-201ENST00000362441 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-12-201ENST00000362583 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-29-201ENST00000362834 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-9-201ENST00000362912 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-21-201ENST00000362963 81 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-14-201ENST00000363090 81 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-13-201ENST00000363358 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-41-201ENST00000363608 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-11-201ENST00000363616 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-5-201ENST00000363633 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-39-201ENST00000363694 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-4-201ENST00000363810 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-16-201ENST00000363887 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-6-201ENST00000363942 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-42-201ENST00000364273 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 RNU4-16P-201ENST00000364737 141 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms