Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 MIR5194-201ENST00000582634 120 ntBASIC3.04□□□□□ -1.92
CHMP3Q9Y3E7 MIR5092-201ENST00000583139 88 ntBASIC3.04□□□□□ -1.92
CHMP3Q9Y3E7 AC078899.2-201ENST00000595282 212 ntBASIC3.04□□□□□ -1.92
CHMP3Q9Y3E7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHMP3Q9Y3E7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.04□□□□□ -1.92
CHMP3Q9Y3E7 AC007336.1-201ENST00000576365 3828 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 RNU6-1113P-201ENST00000384348 107 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 Y_RNA.544-201ENST00000384650 113 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 AC015922.2-201ENST00000435593 184 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 AC090821.2-201ENST00000523552 176 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 MIR3163-201ENST00000581592 73 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 AC046143.2-201ENST00000609789 160 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 AC064859.1-201ENST00000624741 174 ntBASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP3Q9Y3E7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 RNA5SP456-201ENST00000364002 114 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 Y_RNA.454-201ENST00000384224 113 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 RNU7-6P-201ENST00000516845 62 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-762P-201ENST00000517107 102 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 MIR3683-201ENST00000580847 82 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 AL513534.2-201ENST00000603836 250 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 SNORA28-201ENST00000606769 126 ntBASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-424P-201ENST00000384367 105 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 RNY1P7-201ENST00000384743 110 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 RNU4-53P-201ENST00000410828 140 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 AL512326.2-201ENST00000426359 151 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 RNU7-45P-201ENST00000459460 63 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 AC026436.1-201ENST00000510537 270 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-998P-201ENST00000515894 101 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 RNA5SP24-201ENST00000516478 95 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 MIR3126-201ENST00000577443 74 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 AC027279.3-201ENST00000625055 122 ntBASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CHMP3Q9Y3E7 MIR29C-201ENST00000385231 88 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 RNU11-3P-201ENST00000391111 133 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 MIR1302-4-201ENST00000408701 150 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 RNA5SP144-201ENST00000410846 116 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 RPL39P25-201ENST00000449384 154 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 RNA5SP168-201ENST00000516642 112 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 AC095038.3-201ENST00000634439 195 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 AL162726.3-218ENST00000636401 95 ntBASIC3□□□□□ -1.93
CHMP3Q9Y3E7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
CHMP3Q9Y3E7 MIR516B2-201ENST00000385190 85 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 MIR1283-2-201ENST00000408621 87 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-904P-201ENST00000516206 101 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 RNVU1-2-201ENST00000516326 135 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 MIR4778-201ENST00000577635 80 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 MIR4446-201ENST00000578505 67 ntBASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CHMP3Q9Y3E7 Y_RNA.388-201ENST00000383919 113 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-816P-201ENST00000390914 107 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-1268P-201ENST00000391214 107 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-1239P-201ENST00000391310 107 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 AL035398.1-201ENST00000430869 322 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 HMGN2P3-201ENST00000433603 273 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 HMGN2P5-201ENST00000436882 273 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 AC093850.1-201ENST00000454121 251 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 RNU2-11P-201ENST00000459191 187 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 RNU6-970P-201ENST00000516312 107 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 MIR3945-201ENST00000581853 98 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 AL442644.1-201ENST00000454390 3105 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 AC092881.1-201ENST00000638218 2733 ntBASIC2.98□□□□□ -1.93
CHMP3Q9Y3E7 SNORA63D-201ENST00000364359 132 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 SNORA3.2-201ENST00000408221 125 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 Z98742.3-201ENST00000418637 326 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 SUMO1P4-201ENST00000429430 302 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 RNU7-12P-201ENST00000516030 62 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 AC004812.1-201ENST00000540773 146 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 AC103810.6-201ENST00000606708 136 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 AC087741.2-201ENST00000619415 172 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 AC021613.1-201ENST00000623880 111 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 MIR1291-201ENST00000627649 87 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 AC080100.1-201ENST00000624239 5356 ntBASIC2.97□□□□□ -1.93
CHMP3Q9Y3E7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CHMP3Q9Y3E7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-34-201ENST00000362441 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-12-201ENST00000362583 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-29-201ENST00000362834 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-9-201ENST00000362912 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-21-201ENST00000362963 81 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-14-201ENST00000363090 81 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 U8.2-201ENST00000363156 134 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-13-201ENST00000363358 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 RNU6-833P-201ENST00000363486 107 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-41-201ENST00000363608 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-11-201ENST00000363616 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-5-201ENST00000363633 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-39-201ENST00000363694 82 ntBASIC2.96□□□□□ -1.94
CHMP3Q9Y3E7 SNORD115-4-201ENST00000363810 82 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 309.8 ms