Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 RNU6-833P-201ENST00000363486 107 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-923P-201ENST00000364753 107 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 SNORD12-201ENST00000391002 90 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-493P-201ENST00000391321 108 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 MIR1287-201ENST00000408492 90 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 RNU7-116P-201ENST00000516940 62 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 AC120024.3-201ENST00000603167 156 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 SNORD114-21-201ENST00000606412 72 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 AL021707.8-201ENST00000609428 183 ntBASIC1.13□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.20-201ENST00000362479 113 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-379P-201ENST00000363813 104 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-674P-201ENST00000363831 107 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.229-201ENST00000364347 113 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 U8.5-201ENST00000364528 136 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.308-201ENST00000365043 101 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-163P-201ENST00000384396 106 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 CYCTP-201ENST00000504253 315 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.679-201ENST00000516416 91 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 SNORD45.4-201ENST00000516629 73 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-388P-201ENST00000517012 105 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-389P-201ENST00000517048 105 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 MIR4308-201ENST00000580634 81 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 MIR4762-201ENST00000585261 75 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 FAM106DP-201ENST00000586416 501 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 AL442067.1-201ENST00000613261 223 ntBASIC1.12□□□□□ -2.23
GTF3C4Q9UKN8 RNY4P28-201ENST00000365281 93 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 SNORD114-22-201ENST00000365423 72 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-47P-201ENST00000383866 107 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 MIR626-201ENST00000385032 94 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-1228P-201ENST00000391014 107 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-1248P-201ENST00000391096 64 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 MIR1298-201ENST00000408783 112 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 SNRPGP14-201ENST00000435400 219 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 snoU13.25-201ENST00000458945 104 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 AC022559.1-201ENST00000520905 205 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 AC027279.3-201ENST00000625055 122 ntBASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
GTF3C4Q9UKN8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.304-201ENST00000365011 112 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.556-201ENST00000384677 113 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-131P-201ENST00000391144 107 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 SNORD58.1-201ENST00000391313 66 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.626-201ENST00000411288 95 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-1023P-201ENST00000516137 106 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-1271P-201ENST00000517049 105 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 AC090142.3-201ENST00000519012 385 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
GTF3C4Q9UKN8 RNU6-1084P-201ENST00000362498 107 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 SNORA20.1-201ENST00000364790 130 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 MIR548H3-201ENST00000408771 118 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 AC004817.2-201ENST00000561794 651 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 MIR4724-201ENST00000579485 89 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 AC008507.4-201ENST00000585464 127 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 AC006006.1-201ENST00000603082 144 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 U6.104-201ENST00000637979 90 ntBASIC1.09□□□□□ -2.23
GTF3C4Q9UKN8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
GTF3C4Q9UKN8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 MIR367-201ENST00000362299 68 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.188-201ENST00000363952 111 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 SNORD28B-201ENST00000390993 75 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 RNU6-381P-201ENST00000391259 108 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 RNU7-149P-201ENST00000516739 59 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 AC007751.1-201ENST00000529260 376 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 JPX_2.1-201ENST00000614161 69 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.802-201ENST00000614892 130 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 MIR6767-201ENST00000637302 66 ntBASIC1.08□□□□□ -2.24
GTF3C4Q9UKN8 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 RNU6-268P-201ENST00000364174 107 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 MIR570-201ENST00000384917 97 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 MIR526A2-201ENST00000390198 65 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 RNU6-1007P-201ENST00000516586 107 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 RNU2-4P-201ENST00000606190 192 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 uc_338.4-201ENST00000616635 176 ntBASIC1.07□□□□□ -2.24
GTF3C4Q9UKN8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
GTF3C4Q9UKN8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 287.3 ms