Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MIR3133-201ENST00000583157 78 ntBASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
NIPSNAP3AQ9UFN0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 U8.17-201ENST00000391292 132 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR513C-201ENST00000401352 84 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 AL603908.1-201ENST00000406098 201 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 snoU13.26-201ENST00000459452 105 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 UBL5P3-201ENST00000475112 231 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU4-57P-201ENST00000515980 135 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA25.12-201ENST00000516202 82 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.703-201ENST00000516846 111 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU7-181P-201ENST00000517234 74 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC090049.2-201ENST00000550377 109 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 AL365434.2-201ENST00000607979 234 ntBASIC1.82□□□□□ -2.12
NIPSNAP3AQ9UFN0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-1292P-201ENST00000383856 107 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNY1P5-201ENST00000383890 115 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-1189P-201ENST00000383958 107 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-746P-201ENST00000384112 109 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-125P-201ENST00000384505 107 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AL451046.2-201ENST00000403074 277 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC087499.4-201ENST00000448505 178 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORD123-201ENST00000459473 70 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AP003484.1-201ENST00000530974 250 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NIPSNAP3AQ9UFN0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR624-201ENST00000385217 97 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORD36C-201ENST00000516733 66 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-922P-201ENST00000516753 99 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR548X2-201ENST00000579776 100 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR6715A-201ENST00000615929 79 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR219B-201ENST00000637023 88 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 AL442644.1-201ENST00000454390 3105 ntBASIC1.8□□□□□ -2.12
NIPSNAP3AQ9UFN0 AP000648.3-201ENST00000623539 4507 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR653-201ENST00000385279 96 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 snoU13.15-201ENST00000459407 104 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC019176.1-201ENST00000518519 225 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA1.2-201ENST00000365189 134 ntBASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 Y_RNA.343-201ENST00000365354 112 ntBASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 RNU6-938P-201ENST00000411285 103 ntBASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
NIPSNAP3AQ9UFN0 MIR302D-201ENST00000362275 68 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD1A-201ENST00000364968 72 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.497-201ENST00000384447 98 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.584-201ENST00000391090 114 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC107297.1-201ENST00000459991 176 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC008834.1-201ENST00000511612 175 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR3937-201ENST00000580135 106 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR5197-201ENST00000583721 112 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC131055.1-201ENST00000584626 316 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD114-1-201ENST00000362705 72 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-187P-201ENST00000384139 106 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR504-201ENST00000385065 83 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR569-201ENST00000385228 96 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNX2P2-201ENST00000424553 323 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 RNU6-426P-201ENST00000516464 97 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC090821.2-201ENST00000523552 176 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR548AR-201ENST00000582191 57 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 MIR376A2-201ENST00000636782 80 ntBASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-34-201ENST00000362441 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-12-201ENST00000362583 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 Y_RNA.52-201ENST00000362760 96 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-29-201ENST00000362834 82 ntBASIC1.75□□□□□ -2.13
NIPSNAP3AQ9UFN0 SNORD115-9-201ENST00000362912 82 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms