Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 AL133255.1-201ENST00000606374 441 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 AL590491.3-201ENST00000610731 82 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 DISC2.1-201ENST00000612827 205 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 AL391099.1-201ENST00000624635 187 ntBASIC-0.88□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.89□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.89□□□□□ -2.55
VPS29Q9UBQ0 SNORD5.1-201ENST00000458800 75 ntBASIC-0.89□□□□□ -2.55
VPS29Q9UBQ0 RNU7-115P-201ENST00000516433 55 ntBASIC-0.89□□□□□ -2.55
VPS29Q9UBQ0 AC018462.2-201ENST00000605375 395 ntBASIC-0.89□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 SNORA22B-201ENST00000383876 138 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 RNU6-926P-201ENST00000384075 107 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 RNU6-708P-201ENST00000384217 107 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 SNORA72.6-201ENST00000384520 129 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 MTCO3P40-201ENST00000392516 676 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 MIR1278-201ENST00000408753 81 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 RNU6-437P-201ENST00000459408 95 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 MIR3942-201ENST00000585264 109 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 AC005014.3-201ENST00000605985 190 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 AL050303.3-201ENST00000613704 284 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 MIR548AY-201ENST00000617669 107 ntBASIC-0.9□□□□□ -2.55
VPS29Q9UBQ0 RNA5SP205-201ENST00000364653 136 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 SNORD11-201ENST00000459124 84 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 RNU2-11P-201ENST00000459191 187 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 RPS29P24-201ENST00000486345 171 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 RNU6-273P-201ENST00000516937 96 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 MIR2355-201ENST00000517199 87 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 AP003072.1-201ENST00000531740 145 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 MTND5P34-201ENST00000568888 325 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 MIR4802-201ENST00000581881 80 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 MIR6507-201ENST00000613630 70 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 MIR6128-201ENST00000615528 109 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 AL662814.1-201ENST00000617364 121 ntBASIC-0.91□□□□□ -2.56
VPS29Q9UBQ0 RNU6-726P-201ENST00000364680 107 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 SNORA40.5-201ENST00000391061 128 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 MIR876-201ENST00000401147 81 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 MTND2P22-201ENST00000444325 1033 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 RNU6-470P-201ENST00000515954 104 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 MIR4493-201ENST00000584016 73 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 AP001282.2-201ENST00000616149 309 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 AC084368.1-201ENST00000620935 65 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 AL162376.1-201ENST00000624117 175 ntBASIC-0.92□□□□□ -2.56
VPS29Q9UBQ0 MIR101-2-201ENST00000362195 79 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 SNORA27-201ENST00000384323 126 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 U8.15-201ENST00000390947 134 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 AL590004.1-201ENST00000405321 300 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 RNA5SP237-201ENST00000410414 113 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 RNU6-735P-201ENST00000410612 107 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 MIR4491-201ENST00000581087 68 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 AL080274.1-201ENST00000605565 220 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 AC024933.1-201ENST00000608472 348 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 MIR6863-201ENST00000636112 90 ntBASIC-0.93□□□□□ -2.56
VPS29Q9UBQ0 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 RNA5SP98-201ENST00000363158 137 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 MIR548L-201ENST00000408303 86 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 MIR548I3-201ENST00000408378 149 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 AC108059.2-201ENST00000434626 151 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 FCF1P4-201ENST00000448326 183 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 RNU6-956P-201ENST00000458868 103 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 AC073114.1-201ENST00000612027 490 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 uc_338.28-201ENST00000612082 187 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 AC105081.1-201ENST00000617727 106 ntBASIC-0.94□□□□□ -2.56
VPS29Q9UBQ0 AL596211.1-201ENST00000569873 2277 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD115-28-201ENST00000363931 81 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD116-9-201ENST00000384000 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 RNU6-20P-201ENST00000384106 107 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORA1-201ENST00000384107 130 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD116-3-201ENST00000384287 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD116-8-201ENST00000384365 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD116-7-201ENST00000384404 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 SNORD116-5-201ENST00000384462 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 MT-TQ-201ENST00000387372 72 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 MIR1912-201ENST00000410389 80 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 AC098826.2-201ENST00000452011 651 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 RPL7P42-201ENST00000481005 679 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 AC010424.1-201ENST00000506336 297 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 AL512360.1-201ENST00000555346 234 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 MIR3662-201ENST00000637030 95 ntBASIC-0.95□□□□□ -2.56
VPS29Q9UBQ0 RNU4-50P-201ENST00000364361 141 ntBASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
VPS29Q9UBQ0 SNORA3B-201ENST00000391305 131 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms