Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORA40-201ENST00000388090 126 ntBASIC1.96□□□□□ -2.1
DKK3Q9UBP4 AL606753.1-201ENST00000427435 87 ntBASIC1.96□□□□□ -2.1
DKK3Q9UBP4 AC090142.3-201ENST00000519012 385 ntBASIC1.96□□□□□ -2.1
DKK3Q9UBP4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
DKK3Q9UBP4 AC007751.1-201ENST00000529260 376 ntBASIC1.96□□□□□ -2.1
DKK3Q9UBP4 AC091895.1-201ENST00000624494 256 ntBASIC1.96□□□□□ -2.1
DKK3Q9UBP4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
DKK3Q9UBP4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DKK3Q9UBP4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
DKK3Q9UBP4 MIRLET7C-201ENST00000362160 84 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 RNU6-442P-201ENST00000383968 104 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 SNORD61-201ENST00000384252 73 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.542-201ENST00000384641 111 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 AL034345.1-201ENST00000407768 123 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 MIR548I2-201ENST00000408348 149 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.95□□□□□ -2.1
DKK3Q9UBP4 SNRPGP14-201ENST00000435400 219 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 HMGN2P32-201ENST00000444648 269 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 SNORD45.4-201ENST00000516629 73 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 AC027279.3-201ENST00000625055 122 ntBASIC1.95□□□□□ -2.1
DKK3Q9UBP4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DKK3Q9UBP4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DKK3Q9UBP4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
DKK3Q9UBP4 SNORD14E-201ENST00000364009 85 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.420-201ENST00000384043 110 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 RNU6-959P-201ENST00000384671 107 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 MIR624-201ENST00000385217 97 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 MTND4LP9-201ENST00000427694 174 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 SNRPGP13-201ENST00000442212 177 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 TRMT112P2-201ENST00000512910 132 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 AL359821.1-201ENST00000605519 182 ntBASIC1.94□□□□□ -2.1
DKK3Q9UBP4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNA5SP100-201ENST00000410903 110 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNA5SP59-201ENST00000410922 110 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNA5SP127-201ENST00000411051 133 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.93□□□□□ -2.1
DKK3Q9UBP4 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 HSPE1P9-201ENST00000440046 311 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 CYCTP-201ENST00000504253 315 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNA5SP272-201ENST00000516095 111 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.666-201ENST00000516187 112 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 AC131055.1-201ENST00000584626 316 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 AL442644.1-201ENST00000454390 3105 ntBASIC1.93□□□□□ -2.1
DKK3Q9UBP4 RNY1P11-201ENST00000363759 113 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 RNU6-268P-201ENST00000364174 107 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 SNORA4.2-201ENST00000365313 147 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 RNU6-1117P-201ENST00000384525 104 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 MIR548A2-201ENST00000384956 97 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 MIR802-201ENST00000390235 94 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 RNU6-693P-201ENST00000516134 107 ntBASIC1.92□□□□□ -2.1
DKK3Q9UBP4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
DKK3Q9UBP4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
DKK3Q9UBP4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 MIR539-201ENST00000365690 78 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 RNU6-460P-201ENST00000391158 108 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 RNU2-7P-201ENST00000410794 178 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 CYCSP49-201ENST00000420810 319 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 AP001328.1-201ENST00000528550 176 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
DKK3Q9UBP4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.9□□□□□ -2.1
DKK3Q9UBP4 Y_RNA.120-201ENST00000363304 110 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 RNU6-833P-201ENST00000363486 107 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 SNORA1-201ENST00000384107 130 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 SNORA20-201ENST00000384662 132 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 MIR518F-201ENST00000384973 87 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 MIR891A-201ENST00000401237 79 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.9□□□□□ -2.11
DKK3Q9UBP4 snoU13.27-201ENST00000459278 104 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.9□□□□□ -2.11
DKK3Q9UBP4 AC114811.1-201ENST00000507207 168 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 RNA5SP168-201ENST00000516642 112 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.9□□□□□ -2.11
DKK3Q9UBP4 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
DKK3Q9UBP4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
DKK3Q9UBP4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.89□□□□□ -2.11
DKK3Q9UBP4 RNU6-163P-201ENST00000384396 106 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 RNU6-360P-201ENST00000390944 104 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 U8.16-201ENST00000391279 133 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 CALM2P4-201ENST00000430810 426 ntBASIC1.89□□□□□ -2.11
DKK3Q9UBP4 RNU6-830P-201ENST00000516353 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms