Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AP001282.2-201ENST00000616149 309 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 U6.101-201ENST00000637707 76 ntBASIC-1.56□□□□□ -2.66
CHD7Q9P2D1 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 AC096949.1-201ENST00000412047 152 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 AC079248.2-201ENST00000623779 326 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 USP9YP30-201ENST00000430729 455 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 TPTE2P5-203ENST00000458118 728 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 RNU6-344P-201ENST00000516635 111 ntBASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.57□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 SNORD51.1-201ENST00000365405 77 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 RNU6-337P-201ENST00000391243 106 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 RNA5SP237-201ENST00000410414 113 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 MTCO3P19-201ENST00000415864 321 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AP002795.1-201ENST00000534879 84 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AC090502.2-201ENST00000549267 280 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 MIR4464-201ENST00000580818 92 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 RNU6-949P-201ENST00000384040 107 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 RNU6-114P-201ENST00000384704 105 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AC002542.1-201ENST00000440683 193 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 SNORA31.3-201ENST00000516029 96 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AC120024.2-201ENST00000576526 175 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AL121757.2-201ENST00000611223 313 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 AL078596.1-201ENST00000624856 447 ntBASIC-1.58□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 BX295541.1-201ENST00000417774 250 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AC097635.1-201ENST00000450678 155 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 MTCO1P29-201ENST00000496868 288 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RNU4-58P-201ENST00000363192 141 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AC004386.2-201ENST00000441858 148 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RNY4P25-201ENST00000459254 96 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RNU6-958P-201ENST00000516995 106 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RMST_10.1-201ENST00000616309 154 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 SNORD114-4-201ENST00000363962 75 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 SNORA75B-201ENST00000384053 137 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RNU6-429P-201ENST00000384582 108 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AL590084.2-201ENST00000401481 382 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 RNU6-830P-201ENST00000516353 107 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AC090615.1-201ENST00000577519 154 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 AP001836.1-201ENST00000604675 523 ntBASIC-1.59□□□□□ -2.66
CHD7Q9P2D1 SNORD115-29-201ENST00000362834 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-14-201ENST00000363090 81 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-11-201ENST00000363616 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-5-201ENST00000363633 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-39-201ENST00000363694 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD14E-201ENST00000364009 85 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-1-201ENST00000364961 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-43-201ENST00000365503 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 SNORD115-36-201ENST00000365629 82 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 RNU6-80P-201ENST00000384195 107 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 RNU6-21P-201ENST00000384710 107 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 MIR548O-201ENST00000408583 114 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 BX119904.4-201ENST00000424402 301 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 MIR5683-201ENST00000636514 76 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 RNU6-519P-201ENST00000410590 108 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 MRPS10P1-201ENST00000448483 130 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 RNU2-13P-201ENST00000515909 113 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 AL008718.3-201ENST00000610217 321 ntBASIC-1.6□□□□□ -2.67
CHD7Q9P2D1 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 RNU6-527P-201ENST00000363425 104 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 RNU6-325P-201ENST00000411132 105 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 AC005345.1-201ENST00000431868 217 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 MIR548AG2-201ENST00000581228 64 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 AC006435.5-201ENST00000624486 112 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 AC103706.2-201ENST00000638080 240 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 RNU6-216P-201ENST00000363282 104 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 MIR208B-201ENST00000401172 77 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 SNORD65B-201ENST00000459126 73 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 snoU109.3-201ENST00000459477 145 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 SNRPGP7-201ENST00000469016 106 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 RPL39P36-201ENST00000490784 156 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 AC145350.1-201ENST00000567426 208 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 MIR3920-201ENST00000581751 86 ntBASIC-1.61□□□□□ -2.67
CHD7Q9P2D1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 RNU6-141P-201ENST00000410499 105 ntBASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 RNU2-14P-201ENST00000411053 191 ntBASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 MTATP6P19-201ENST00000413797 659 ntBASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 MTND1P36-201ENST00000522384 936 ntBASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 AC087883.1-201ENST00000551882 391 ntBASIC-1.62□□□□□ -2.67
CHD7Q9P2D1 AC026470.2-201ENST00000561492 181 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms