Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 AL603755.1-201ENST00000619504 163 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-702P-201ENST00000364982 107 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 SNORD115-47-201ENST00000391226 86 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 AL603910.2-201ENST00000407268 136 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU7-87P-201ENST00000459343 62 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RPS29P24-201ENST00000486345 171 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-693P-201ENST00000516134 107 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 MIR4677-201ENST00000584153 80 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 AC006157.1-201ENST00000611750 366 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 AL359880.1-201ENST00000621879 266 ntBASIC-0.45□□□□□ -2.48
SCN3AQ9NY46 RNU6-674P-201ENST00000363831 107 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 RNU6-593P-201ENST00000364716 112 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 SNORD49B-201ENST00000365172 72 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 SNORA27-201ENST00000384323 126 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 RNU6-159P-201ENST00000391080 106 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 SNORA75.4-201ENST00000391278 119 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC236972.2-201ENST00000434979 310 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC074198.2-201ENST00000508153 258 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 RNA5SP47-201ENST00000517230 109 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 AC127455.1-201ENST00000565496 145 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 MIR378D2-201ENST00000580636 98 ntBASIC-0.46□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 RNU6-99P-201ENST00000364721 107 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 SNORD72-201ENST00000390994 80 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 PRDX4P1-201ENST00000507189 574 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 RNU6-998P-201ENST00000515894 101 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 AC005899.2-201ENST00000584353 90 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 AC018462.2-201ENST00000605375 395 ntBASIC-0.47□□□□□ -2.48
SCN3AQ9NY46 RNU6-874P-201ENST00000362390 105 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 snoU13.11-201ENST00000459219 104 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 RNU1-54P-201ENST00000517181 120 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 AC006362.1-201ENST00000567392 174 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 MIR3925-201ENST00000584674 77 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 MIR3942-201ENST00000585264 109 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 MIR8064-201ENST00000612863 90 ntBASIC-0.47□□□□□ -2.49
SCN3AQ9NY46 SNORD115-28-201ENST00000363931 81 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 RNU6-652P-201ENST00000365488 107 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 SNORA26.6-201ENST00000391256 115 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AF228730.4-201ENST00000421457 183 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC145350.1-201ENST00000567426 208 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC090617.10-201ENST00000624308 134 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 RNA5SP266-201ENST00000410273 108 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 RNU6-735P-201ENST00000410612 107 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 MTCO2P27-201ENST00000420740 428 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC011352.1-201ENST00000512300 793 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 RNU6-897P-201ENST00000517135 105 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AL512360.1-201ENST00000555346 234 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC119751.7-201ENST00000600494 245 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC124312.5-201ENST00000604451 268 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AL080274.1-201ENST00000605565 220 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 AC090582.1-201ENST00000636321 199 ntBASIC-0.48□□□□□ -2.49
SCN3AQ9NY46 RNU6-801P-201ENST00000364087 105 ntBASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 MTND4P28-201ENST00000426217 387 ntBASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 RNU6-273P-201ENST00000516937 96 ntBASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 MTND5P26-201ENST00000426018 1752 ntBASIC-0.49□□□□□ -2.49
SCN3AQ9NY46 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 RNU6-949P-201ENST00000384040 107 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 MIR190B-201ENST00000401119 79 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 RNU4-63P-201ENST00000411313 118 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 MTND4P19-201ENST00000446659 478 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 AC098826.2-201ENST00000452011 651 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 RNU7-141P-201ENST00000459304 62 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 NBR2-204ENST00000587322 63 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 AC005357.1-201ENST00000588399 301 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 AC024933.1-201ENST00000608472 348 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.5□□□□□ -2.49
SCN3AQ9NY46 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 180.3 ms