Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 MIR616-201ENST00000385293 97 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 MT-TG-201ENST00000387429 68 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 AC087685.1-201ENST00000587507 141 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 AC009779.6-201ENST00000603972 165 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 AC015726.2-201ENST00000620112 122 ntBASIC1.17□□□□□ -2.22
NDE1Q9NXR1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NDE1Q9NXR1 MIR411-201ENST00000362239 96 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.83-201ENST00000363005 113 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.16□□□□□ -2.22
NDE1Q9NXR1 RNU7-95P-201ENST00000459222 64 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 RN7SKP164-201ENST00000516138 266 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 AC022559.1-201ENST00000520905 205 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 AC090049.2-201ENST00000550377 109 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
NDE1Q9NXR1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.16□□□□□ -2.22
NDE1Q9NXR1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 MIR489-201ENST00000384923 84 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 MIR653-201ENST00000385279 96 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 AL451046.2-201ENST00000403074 277 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 RNU6-947P-201ENST00000516264 106 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 RNU7-25P-201ENST00000516544 62 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NDE1Q9NXR1 AL512310.8-201ENST00000550183 120 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 MIR5688-201ENST00000580619 83 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 AC090425.1-201ENST00000610007 140 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 ZNF209P-201ENST00000593450 2304 ntBASIC1.15□□□□□ -2.23
NDE1Q9NXR1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.15□□□□□ -2.23
NDE1Q9NXR1 SNORD45.3-201ENST00000363836 72 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 RNU6-484P-201ENST00000384016 107 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 SNORD38C-201ENST00000384381 69 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 MIR548O-201ENST00000408583 114 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
NDE1Q9NXR1 SNRPGP8-201ENST00000454064 226 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 COX6CP14-201ENST00000469580 174 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.14□□□□□ -2.23
NDE1Q9NXR1 RNU6-322P-201ENST00000516010 103 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 CYP3A52P-201ENST00000563326 91 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 MIR3664-201ENST00000579074 99 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 AL645939.4-201ENST00000604495 135 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 AL391903.3-201ENST00000612158 163 ntBASIC1.14□□□□□ -2.23
NDE1Q9NXR1 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 SNORD33-201ENST00000362761 85 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.182-201ENST00000363880 111 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.515-201ENST00000384535 112 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 MIR570-201ENST00000384917 97 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 SNORD28B-201ENST00000390993 75 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 RNU6-918P-201ENST00000391219 106 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.13□□□□□ -2.23
NDE1Q9NXR1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.13□□□□□ -2.23
NDE1Q9NXR1 RNU6-138P-201ENST00000515952 107 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 RNU6-165P-201ENST00000517170 99 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 RNU7-181P-201ENST00000517234 74 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 MIR4744-201ENST00000581563 82 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AL513534.2-201ENST00000603836 250 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AC108706.1-201ENST00000611053 297 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AC006441.5-201ENST00000612680 209 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AC141273.2-201ENST00000618989 130 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
NDE1Q9NXR1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
NDE1Q9NXR1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.432-201ENST00000384087 111 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
NDE1Q9NXR1 RNU2-70P-201ENST00000410718 179 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 AL121914.1-201ENST00000450188 156 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 SNORD123-201ENST00000459473 70 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 SNORD111.1-201ENST00000516421 86 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 AC007751.1-201ENST00000529260 376 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 AC109810.1-201ENST00000534066 224 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.12□□□□□ -2.23
NDE1Q9NXR1 AL157834.3-201ENST00000615543 103 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms