Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 SNORA31.4-201ENST00000516049 129 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 RNU4-71P-201ENST00000516258 113 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 MIR3192-201ENST00000584920 77 ntBASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.27□□□□□ -2.21
SLC6A13Q9NSD5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 MT-TT-201ENST00000387460 66 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 SNORA26-201ENST00000391286 122 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 U8.17-201ENST00000391292 132 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 AL606845.1-201ENST00000404881 255 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 AC048334.1-201ENST00000477975 159 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 SCARNA8-201ENST00000515924 131 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 RNU4-57P-201ENST00000515980 135 ntBASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.26□□□□□ -2.21
SLC6A13Q9NSD5 RNY1P10-201ENST00000363268 113 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNA5SP48-201ENST00000363969 126 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-484P-201ENST00000384016 107 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNU7-41P-201ENST00000515917 61 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-1299P-201ENST00000516316 100 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-453P-201ENST00000516819 85 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-103P-201ENST00000363686 107 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 SNORA1.2-201ENST00000365189 134 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 SNORD24-201ENST00000383884 75 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.432-201ENST00000384087 111 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 SNORD28B-201ENST00000390993 75 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-365P-201ENST00000517113 106 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AC019288.1-201ENST00000557918 224 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 AC008133.2-201ENST00000624540 351 ntBASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.24□□□□□ -2.21
SLC6A13Q9NSD5 RNY1-201ENST00000364228 113 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.308-201ENST00000365043 101 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.618-201ENST00000410949 107 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.626-201ENST00000411288 95 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 snoU13.25-201ENST00000458945 104 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNU1-123P-201ENST00000458950 160 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNA5SP153-201ENST00000516498 76 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNU1-92P-201ENST00000517017 135 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-111P-201ENST00000517179 105 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 AC097639.2-201ENST00000603159 172 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SLC6A13Q9NSD5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.199-201ENST00000364014 102 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 Y_RNA.489-201ENST00000384410 101 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 RNU6-910P-201ENST00000390844 107 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 MIR1287-201ENST00000408492 90 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 RNU2-70P-201ENST00000410718 179 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 SNRPGP8-201ENST00000454064 226 ntBASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.22□□□□□ -2.21
SLC6A13Q9NSD5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.66-201ENST00000362862 102 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-888P-201ENST00000363010 101 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 SNORD45.3-201ENST00000363836 72 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-28-201ENST00000363931 81 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.634-201ENST00000364811 113 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-728P-201ENST00000365375 104 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.401-201ENST00000383965 117 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 MIR548A2-201ENST00000384956 97 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-693P-201ENST00000516134 107 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 RNY3P16-201ENST00000516338 101 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-504P-201ENST00000516568 104 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 AC007751.1-201ENST00000529260 376 ntBASIC1.21□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.91-201ENST00000363042 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms