Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.23□□□□□ -2.21
POLR1BQ9H9Y6 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
POLR1BQ9H9Y6 AC022709.1-201ENST00000615967 87 ntBASIC1.23□□□□□ -2.21
POLR1BQ9H9Y6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 SNORA1.2-201ENST00000365189 134 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 RNY3P5-201ENST00000384127 102 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 RNU2-55P-201ENST00000411146 174 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 SNORD127-201ENST00000458892 86 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 SNORD116-28-201ENST00000516123 91 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 RN7SKP164-201ENST00000516138 266 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 AC100767.1-201ENST00000528178 123 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 AL049861.1-201ENST00000603130 150 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.22□□□□□ -2.21
POLR1BQ9H9Y6 Y_RNA.304-201ENST00000365011 112 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 SNORA80D-201ENST00000384488 135 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 RNU6-910P-201ENST00000390844 107 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 MIR3192-201ENST00000584920 77 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 BX284668.6-201ENST00000606899 438 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 MIR6515-201ENST00000619843 57 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.562-201ENST00000384695 113 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 SNORA26-201ENST00000391286 122 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 U8.17-201ENST00000391292 132 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 AC012433.1-201ENST00000588916 398 ntBASIC1.2□□□□□ -2.22
POLR1BQ9H9Y6 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 MIR548AR-201ENST00000582191 57 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 AC015726.2-201ENST00000620112 122 ntBASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
POLR1BQ9H9Y6 RNU1-124P-201ENST00000363861 145 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 MIR616-201ENST00000385293 97 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.587-201ENST00000391210 103 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 RPS29P29-201ENST00000456396 171 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 AP003716.2-201ENST00000528260 108 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
POLR1BQ9H9Y6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNA5SP264-201ENST00000363115 107 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 SNORD114-26-201ENST00000363543 72 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU4-10P-201ENST00000364383 140 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 SNORD24-201ENST00000383884 75 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.478-201ENST00000384358 107 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.537-201ENST00000384626 109 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU7-41P-201ENST00000515917 61 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 SCARNA8-201ENST00000515924 131 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU4-57P-201ENST00000515980 135 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 AL365265.1-201ENST00000621045 234 ntBASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
POLR1BQ9H9Y6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 MIR568-201ENST00000385036 95 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 MIR548O-201ENST00000408583 114 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 RNU2-38P-201ENST00000410856 79 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 RNU6-651P-201ENST00000411040 105 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 MTND3P2-201ENST00000438452 342 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 snoU13.25-201ENST00000458945 104 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 AL353621.2-201ENST00000605340 133 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 AL442067.1-201ENST00000613261 223 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 U4.1-201ENST00000620349 87 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 AC099654.10-201ENST00000640395 161 ntBASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
POLR1BQ9H9Y6 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
POLR1BQ9H9Y6 Y_RNA.486-201ENST00000384398 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms