Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU6-211P-201ENST00000384047 107 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU6-1160P-201ENST00000384546 104 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 SNORA22C-201ENST00000384614 134 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 U8.17-201ENST00000391292 132 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU6-651P-201ENST00000411040 105 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 TRBVB-201ENST00000477100 408 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU4-57P-201ENST00000515980 135 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.720-201ENST00000517166 92 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 MIR4724-201ENST00000579485 89 ntBASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
RPF1Q9H9Y2 RNU6-238P-201ENST00000363313 106 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 SNORA63C-201ENST00000364578 129 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.422-201ENST00000384054 114 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 MT-TW-201ENST00000387382 68 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 RNA5SP496-201ENST00000391240 109 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 RNU7-25P-201ENST00000516544 62 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.14-201ENST00000362415 103 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNU6-694P-201ENST00000364071 147 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNU6-740P-201ENST00000364734 105 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.483-201ENST00000384380 101 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 MIR606-201ENST00000384851 96 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 MIR548F4-201ENST00000408515 105 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNU7-90P-201ENST00000459216 62 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 MTCO2P24-201ENST00000515611 426 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.666-201ENST00000516187 112 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 RNU6-1007P-201ENST00000516586 107 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 AC006504.6-201ENST00000590142 199 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 FAM71BP1-201ENST00000604431 523 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 AC022709.1-201ENST00000615967 87 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 SEPT14P17-201ENST00000617978 177 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 MIR6515-201ENST00000619843 57 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 MIR4251-201ENST00000635819 61 ntBASIC0.92□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.24-201ENST00000362508 103 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.44-201ENST00000362676 108 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 RNY1-201ENST00000364228 113 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.547-201ENST00000384654 119 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 MIR526A2-201ENST00000390198 65 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 AL392103.1-201ENST00000447000 198 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 SNORD77.4-201ENST00000516158 81 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 AC023827.1-201ENST00000569247 97 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 Y_RNA.802-201ENST00000614892 130 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 MIR8062-201ENST00000621515 85 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.91□□□□□ -2.26
RPF1Q9H9Y2 RNU6-1138P-201ENST00000365359 106 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.486-201ENST00000384398 107 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 RNU6-713P-201ENST00000384761 107 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 AC007751.1-201ENST00000529260 376 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.812-201ENST00000610788 101 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.784-201ENST00000613803 101 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.787-201ENST00000616522 101 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.780-201ENST00000617336 101 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.801-201ENST00000619005 101 ntBASIC0.9□□□□□ -2.27
RPF1Q9H9Y2 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 RNU6-654P-201ENST00000364373 107 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 RNU6-472P-201ENST00000384299 107 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.587-201ENST00000391210 103 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 MIR548O-201ENST00000408583 114 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 AC023449.1-201ENST00000454464 154 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 PDCD5P2-201ENST00000507570 312 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 AC131055.1-201ENST00000584626 316 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 AC006006.1-201ENST00000603082 144 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 MIR4791-201ENST00000607666 84 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 U2.14-201ENST00000615943 113 ntBASIC0.89□□□□□ -2.27
RPF1Q9H9Y2 SNORA63-201ENST00000363450 132 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.229-201ENST00000364347 113 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.370-201ENST00000365589 108 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.574-201ENST00000384766 95 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 MIR626-201ENST00000385032 94 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 MIR942-201ENST00000401111 86 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 SNORD2.1-201ENST00000458762 69 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 RNU2-13P-201ENST00000515909 113 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 AC100767.1-201ENST00000528178 123 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 MIR548AO-201ENST00000579992 96 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 AC008737.2-201ENST00000599446 118 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 MIR6516-201ENST00000630554 81 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 MTND1P7-201ENST00000632801 297 ntBASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
RPF1Q9H9Y2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.242-201ENST00000364473 110 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.461-201ENST00000384263 103 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 RNU6-738P-201ENST00000384531 106 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
RPF1Q9H9Y2 SNORA8.3-201ENST00000384679 139 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 246.9 ms