Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 U8.6-201ENST00000364939 135 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.344-201ENST00000365381 112 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 SNORA19.1-201ENST00000410656 129 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 AC015922.2-201ENST00000435593 184 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 AP001318.4-201ENST00000616637 121 ntBASIC2.17□□□□□ -2.06
SEC61A2Q9H9S3 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-640P-201ENST00000363693 105 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.323-201ENST00000365157 109 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 Y_RNA.369-201ENST00000365568 117 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 SNORA27-201ENST00000384323 126 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 SUMO1P4-201ENST00000429430 302 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 AL513328.1-201ENST00000446460 224 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-109P-201ENST00000516364 107 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 RNU6-184P-201ENST00000516514 107 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 RNA5SP82-201ENST00000516707 92 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 AC068339.1-201ENST00000526965 141 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 MIR4778-201ENST00000577635 80 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 MIR5009-201ENST00000578736 100 ntBASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
SEC61A2Q9H9S3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 SNORD114-30-201ENST00000364448 72 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-1131P-201ENST00000364955 107 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 MIR516B2-201ENST00000385190 85 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 AL627390.1-201ENST00000396055 340 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RN7SKP200-201ENST00000410564 320 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 HMGN2P3-201ENST00000433603 273 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 HMGN2P5-201ENST00000436882 273 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNU7-12P-201ENST00000516030 62 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 SNORA31.4-201ENST00000516049 129 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNVU1-2-201ENST00000516326 135 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNA5SP168-201ENST00000516642 112 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNU7-6P-201ENST00000516845 62 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 AC090821.2-201ENST00000523552 176 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 AL513534.2-201ENST00000603836 250 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-94P-201ENST00000607728 107 ntBASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SEC61A2Q9H9S3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AP000648.3-201ENST00000623539 4507 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 MIR302B-201ENST00000362188 73 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 SNORA38-201ENST00000363946 132 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 RNU1-51P-201ENST00000365345 176 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-424P-201ENST00000384367 105 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 MIR548D2-201ENST00000384955 97 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 MIR590-201ENST00000385008 97 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AL034345.1-201ENST00000407768 123 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AC093850.1-201ENST00000454121 251 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 RNU7-45P-201ENST00000459460 63 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AC141557.1-201ENST00000540982 400 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AC007336.1-201ENST00000576365 3828 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 MIR5194-201ENST00000582634 120 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 AC027279.3-201ENST00000625055 122 ntBASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SEC61A2Q9H9S3 SNORA67.4-201ENST00000384688 142 ntBASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 RNU2-7P-201ENST00000410794 178 ntBASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 AC005336.3-201ENST00000623833 2679 ntBASIC2.13□□□□□ -2.07
SEC61A2Q9H9S3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-1113P-201ENST00000384348 107 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 MIR1283-2-201ENST00000408621 87 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 MIR1267-201ENST00000408723 78 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 RNU2-11P-201ENST00000459191 187 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-998P-201ENST00000515894 101 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 SNORA40.13-201ENST00000516379 120 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 MIR3683-201ENST00000580847 82 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 MIR3163-201ENST00000581592 73 ntBASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.12□□□□□ -2.07
SEC61A2Q9H9S3 MIR21-201ENST00000362134 72 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-49P-201ENST00000384256 107 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 AL512326.2-201ENST00000426359 151 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 AL035398.1-201ENST00000430869 322 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 AC069257.2-201ENST00000441819 155 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 RPL39P25-201ENST00000449384 154 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 RNU7-34P-201ENST00000459394 64 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 AC046143.2-201ENST00000609789 160 ntBASIC2.11□□□□□ -2.07
SEC61A2Q9H9S3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 RNU6-833P-201ENST00000363486 107 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 RNA5SP144-201ENST00000410846 116 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 RNU7-96P-201ENST00000459535 64 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 RNA5SP24-201ENST00000516478 95 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 IGLV3-17-201ENST00000519099 244 ntBASIC2.1□□□□□ -2.07
SEC61A2Q9H9S3 AC021613.1-201ENST00000623880 111 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms