Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 Y_RNA.784-201ENST00000613803 101 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.802-201ENST00000614892 130 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.787-201ENST00000616522 101 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.780-201ENST00000617336 101 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.801-201ENST00000619005 101 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UBQLN3Q9H347 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.24-201ENST00000362508 103 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 RNU6-238P-201ENST00000363313 106 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.224-201ENST00000364308 111 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 RNU6-211P-201ENST00000384047 107 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.587-201ENST00000391210 103 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 MIR548O-201ENST00000408583 114 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.666-201ENST00000516187 112 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.720-201ENST00000517166 92 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 AC012433.1-201ENST00000588916 398 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 AL021707.8-201ENST00000609428 183 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.87□□□□□ -2.27
UBQLN3Q9H347 AL442644.1-201ENST00000454390 3105 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 UBE2WP1-201ENST00000362030 340 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.117-201ENST00000363294 101 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 RNU1-36P-201ENST00000365130 165 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.547-201ENST00000384654 119 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 SCARNA8-201ENST00000515924 131 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 RNU4-57P-201ENST00000515980 135 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 AC109810.1-201ENST00000534066 224 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 AL442663.2-201ENST00000554385 511 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 AC008737.2-201ENST00000599446 118 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 MIR4791-201ENST00000607666 84 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
UBQLN3Q9H347 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.237-201ENST00000364439 102 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.275-201ENST00000364726 110 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 RNU6-1138P-201ENST00000365359 106 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.376-201ENST00000365638 108 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 SNORA8.3-201ENST00000384679 139 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 MIR526A2-201ENST00000390198 65 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 FABP5P4-201ENST00000437203 171 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 AC107297.1-201ENST00000459991 176 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 RNU11-2P-201ENST00000516898 142 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 MIR6516-201ENST00000630554 81 ntBASIC0.85□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.44-201ENST00000362676 108 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 RNU6-654P-201ENST00000364373 107 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.486-201ENST00000384398 107 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 RNU6-738P-201ENST00000384531 106 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.537-201ENST00000384626 109 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.572-201ENST00000384757 98 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 MIR520E-201ENST00000384867 87 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 MIR548F4-201ENST00000408515 105 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 MIR1302-7-201ENST00000408841 72 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
UBQLN3Q9H347 MTCO2P24-201ENST00000515611 426 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 SNORD77.4-201ENST00000516158 81 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
UBQLN3Q9H347 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
UBQLN3Q9H347 AP001282.2-201ENST00000616149 309 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 AC243994.1-201ENST00000618627 109 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 MTND1P7-201ENST00000632801 297 ntBASIC0.84□□□□□ -2.27
UBQLN3Q9H347 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.145-201ENST00000363527 102 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 RNU6-740P-201ENST00000364734 105 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.574-201ENST00000384766 95 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 MT-TW-201ENST00000387382 68 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 RNU6-994P-201ENST00000410507 111 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 AL392103.1-201ENST00000447000 198 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 MIR2115-201ENST00000516657 100 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 MIR4662B-201ENST00000579498 81 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 MIR548AO-201ENST00000579992 96 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 AL360085.1-201ENST00000604713 532 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 RNU6-94P-201ENST00000607728 107 ntBASIC0.83□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.459-201ENST00000384251 102 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.483-201ENST00000384380 101 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 MIR1302-6-201ENST00000408466 90 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 RNA5SP95-201ENST00000410319 137 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 RNU6-693P-201ENST00000516134 107 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 RNA5SP255-201ENST00000516370 107 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 SCARNA15.1-201ENST00000516384 125 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 AL117187.1-201ENST00000555482 181 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 MIR8062-201ENST00000621515 85 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 U6.104-201ENST00000637979 90 ntBASIC0.82□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.229-201ENST00000364347 113 ntBASIC0.81□□□□□ -2.28
UBQLN3Q9H347 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
UBQLN3Q9H347 RNU6-396P-201ENST00000365369 105 ntBASIC0.81□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.461-201ENST00000384263 103 ntBASIC0.81□□□□□ -2.28
UBQLN3Q9H347 Y_RNA.508-201ENST00000384502 114 ntBASIC0.81□□□□□ -2.28
UBQLN3Q9H347 MIR626-201ENST00000385032 94 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms