Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FO082796.1-201ENST00000523795 183 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 AP001328.1-201ENST00000528550 176 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 MIR548AD-201ENST00000584780 82 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 AC005014.2-201ENST00000607795 599 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 DISC2.1-201ENST00000612827 205 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 AL050303.3-201ENST00000613704 284 ntBASIC-0.65□□□□□ -2.51
UPF3BQ9BZI7 SNORD115-34-201ENST00000362441 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-12-201ENST00000362583 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-29-201ENST00000362834 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-9-201ENST00000362912 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-21-201ENST00000362963 81 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-14-201ENST00000363090 81 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-13-201ENST00000363358 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-11-201ENST00000363616 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-5-201ENST00000363633 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-39-201ENST00000363694 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-4-201ENST00000363810 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-16-201ENST00000363887 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-6-201ENST00000363942 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-42-201ENST00000364273 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 RNU4-75P-201ENST00000364621 146 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-15-201ENST00000364809 81 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-1-201ENST00000364961 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-26-201ENST00000365067 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-10-201ENST00000365073 81 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-43-201ENST00000365503 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-36-201ENST00000365629 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD93-201ENST00000408813 74 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 MTATP6P26-201ENST00000445926 662 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 MTND4P19-201ENST00000446659 478 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 AL138752.1-201ENST00000452964 351 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD5.1-201ENST00000458800 75 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 MTND3P7-201ENST00000474435 343 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 AC006600.1-201ENST00000572529 153 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 MIR4432-201ENST00000581823 84 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 AP003357.1-201ENST00000604497 148 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 SNORD115-40-201ENST00000606510 82 ntBASIC-0.66□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 MTCO3P40-201ENST00000392516 676 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 RNA5SP118-201ENST00000410385 109 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 RNU6-710P-201ENST00000410424 105 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 MIR2681-201ENST00000581814 105 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 AC244669.1-204ENST00000621564 178 ntBASIC-0.67□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 RNU4-32P-201ENST00000363404 141 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 MIR601-201ENST00000385256 79 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 SNORD12C-201ENST00000386307 89 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 MTND2P22-201ENST00000444325 1033 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 RNU7-25P-201ENST00000516544 62 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 RNU2-60P-201ENST00000517290 128 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 AC131281.1-201ENST00000522984 164 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 AC024405.2-202ENST00000532731 184 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 AP000942.4-201ENST00000604811 241 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 MIR6082-201ENST00000613604 109 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 AL391099.1-201ENST00000624635 187 ntBASIC-0.68□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 RNA5SP169-201ENST00000517268 117 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 AC127455.1-201ENST00000565496 145 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 MIR3925-201ENST00000584674 77 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 AL442067.1-201ENST00000613261 223 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 MIR6514-201ENST00000622549 70 ntBASIC-0.69□□□□□ -2.52
UPF3BQ9BZI7 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 RNU4-84P-201ENST00000364200 139 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 RNU6-155P-201ENST00000516347 100 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 RNU6-966P-201ENST00000516479 104 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 RNU6-765P-201ENST00000516916 99 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 RNU1-54P-201ENST00000517181 120 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 MIR3942-201ENST00000585264 109 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 AC018462.2-201ENST00000605375 395 ntBASIC-0.7□□□□□ -2.52
UPF3BQ9BZI7 MIR655-201ENST00000362159 97 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 RNU6-291P-201ENST00000384720 107 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 AC010424.1-201ENST00000506336 297 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 RNU7-53P-201ENST00000516705 60 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 AC093424.1-201ENST00000604999 338 ntBASIC-0.71□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 MIR548L-201ENST00000408303 86 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 AC244250.2-201ENST00000418731 148 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 RNU7-115P-201ENST00000516433 55 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 CR383656.4-201ENST00000546909 122 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 MIR5706-201ENST00000579841 80 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 AL590491.3-201ENST00000610731 82 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.72□□□□□ -2.52
UPF3BQ9BZI7 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.73□□□□□ -2.53
UPF3BQ9BZI7 SNORA3B-201ENST00000391305 131 ntBASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms