Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MTCO2P33-201ENST00000402100 465 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 SNORA36B-201ENST00000410438 131 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 MTND5P20-201ENST00000448677 143 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 U8.20-201ENST00000459445 131 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 RPL23AP91-201ENST00000569211 455 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 RPS29P30-201ENST00000600975 111 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 AL080274.1-201ENST00000605565 220 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 AC006157.1-201ENST00000611750 366 ntBASIC0.41□□□□□ -2.34
RPAP1Q9BWH6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-369P-201ENST00000362515 102 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.222-201ENST00000364264 102 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU4-67P-201ENST00000364569 141 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 SNORA1.2-201ENST00000365189 134 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.419-201ENST00000384041 102 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.439-201ENST00000384119 94 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 SNORA72.4-201ENST00000384174 132 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-102P-201ENST00000384485 104 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-1009P-201ENST00000390996 107 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 SNORD11-201ENST00000459124 84 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-437P-201ENST00000459408 95 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-976P-201ENST00000516086 111 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 RNU6-191P-201ENST00000516295 94 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 AC040926.1-201ENST00000530195 238 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 MIR548S-201ENST00000581352 82 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 AC006441.5-201ENST00000612680 209 ntBASIC0.4□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.105-201ENST00000363182 111 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNU6-674P-201ENST00000363831 107 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNU6-934P-201ENST00000365154 107 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.376-201ENST00000365638 108 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.395-201ENST00000383945 109 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.494-201ENST00000384432 111 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MT-TN-201ENST00000387400 73 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNU6-308P-201ENST00000390957 107 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR1302-11-201ENST00000408051 138 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR1302-9-201ENST00000408365 138 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR1302-10-201ENST00000408734 138 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNU6-177P-201ENST00000411257 104 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MTND3P22-201ENST00000510932 243 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 RNU6-1007P-201ENST00000516586 107 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.702-201ENST00000516843 96 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR4801-201ENST00000582704 82 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 AC005357.1-201ENST00000588399 301 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR1302-2-201ENST00000607096 138 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 AC015726.2-201ENST00000620112 122 ntBASIC0.39□□□□□ -2.35
RPAP1Q9BWH6 MIR369-201ENST00000362155 70 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 SNORD45.3-201ENST00000363836 72 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 SNORD42.2-201ENST00000365570 69 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RNU6-121P-201ENST00000410525 99 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RNU6-847P-201ENST00000411115 108 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 AC236972.2-201ENST00000434979 310 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 MTND4P19-201ENST00000446659 478 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 HSPE1P25-201ENST00000455484 251 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 snoU13.21-201ENST00000459368 105 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.637-201ENST00000459424 114 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RNU2-13P-201ENST00000515909 113 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 SCARNA8-201ENST00000515924 131 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RN7SKP12-201ENST00000516275 143 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RNU6-764P-201ENST00000516396 105 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 LARP7P1-201ENST00000605576 316 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 AL133255.1-201ENST00000606374 441 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 AC067863.3-201ENST00000624172 122 ntBASIC0.38□□□□□ -2.35
RPAP1Q9BWH6 SNORD113-8-201ENST00000363497 74 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 RNU6-763P-201ENST00000390865 106 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 SNORD115-46-201ENST00000390982 71 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 RNU6-383P-201ENST00000410864 94 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 AC090844.1-201ENST00000422019 156 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 PMCHL1-202ENST00000423102 261 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 SEPT14P8-201ENST00000508026 178 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 AP003327.1-201ENST00000529684 127 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 AP000753.3-201ENST00000604083 169 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 SNORD113-5-201ENST00000607261 78 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 AC022140.2-201ENST00000623500 188 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 MTND4P29-201ENST00000503122 1372 ntBASIC0.37□□□□□ -2.35
RPAP1Q9BWH6 MIR377-201ENST00000362145 69 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.242-201ENST00000364473 110 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-474P-201ENST00000384243 107 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-125P-201ENST00000384505 107 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-21P-201ENST00000384710 107 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 MIR520F-201ENST00000384824 87 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 MIR573-201ENST00000384964 99 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 MIR140-201ENST00000385282 100 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-205P-201ENST00000390858 107 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 POLR2KP2-201ENST00000438155 177 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 MRPS35P2-201ENST00000508242 191 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-475P-201ENST00000516073 104 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-397P-201ENST00000516226 104 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 Y_RNA.715-201ENST00000517082 110 ntBASIC0.36□□□□□ -2.35
RPAP1Q9BWH6 RNU6-897P-201ENST00000517135 105 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms