Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MIR563-201ENST00000385080 79 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 MIR610-201ENST00000385139 96 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 SNORA36B-201ENST00000410438 131 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 MTND3P8-201ENST00000412909 339 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 AL512326.2-201ENST00000426359 151 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 AC144568.1-201ENST00000520139 137 ntBASIC-0.23□□□□□ -2.45
VAT1Q99536 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.23□□□□□ -2.45
VAT1Q99536 MIR30D-201ENST00000362283 70 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 SNORD81.1-201ENST00000363064 77 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 SNORA2A-201ENST00000383885 135 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 MIR548O-201ENST00000408583 114 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 FCF1P9-201ENST00000412546 282 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 HMGN1P33-201ENST00000432945 451 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.24□□□□□ -2.45
VAT1Q99536 RNU6-469P-201ENST00000516253 101 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 AC090517.2-201ENST00000614966 680 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 AL669831.3-213ENST00000636676 183 ntBASIC-0.24□□□□□ -2.45
VAT1Q99536 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 RNA5SP325-201ENST00000363756 130 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 RNU6-756P-201ENST00000383997 107 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 RNU6-602P-201ENST00000411155 105 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 AC024067.1-201ENST00000426199 223 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 RNU7-4P-201ENST00000516961 62 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 RNU6-264P-201ENST00000517134 104 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 AC024909.2-201ENST00000553035 286 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 AP000942.4-201ENST00000604811 241 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 AL109933.3-201ENST00000619095 188 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 MIR7111-201ENST00000619751 72 ntBASIC-0.25□□□□□ -2.45
VAT1Q99536 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 RNU6-708P-201ENST00000384217 107 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 RNU6-929P-201ENST00000384429 107 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 MT-TF-201ENST00000387314 71 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 MTCO1P5-201ENST00000433573 344 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 RNU7-141P-201ENST00000459304 62 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.26□□□□□ -2.45
VAT1Q99536 MIR4423-201ENST00000580922 80 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 MIR8066-201ENST00000617280 78 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 MIR6828-201ENST00000636181 60 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 U6.92-201ENST00000636464 89 ntBASIC-0.26□□□□□ -2.45
VAT1Q99536 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 RNU6-740P-201ENST00000364734 105 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 SNORD12C-201ENST00000386307 89 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 MIR760-201ENST00000390220 80 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 SNORA26-201ENST00000391286 122 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 RNU7-129P-201ENST00000516128 62 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 AC026407.1-201ENST00000518369 204 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.27□□□□□ -2.45
VAT1Q99536 MIR2909-201ENST00000617113 69 ntBASIC-0.27□□□□□ -2.45
VAT1Q99536 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 SNORA1.1-201ENST00000364671 133 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 RNU2-14P-201ENST00000411053 191 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 SUMO1P3-201ENST00000439961 304 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 RNU6-848P-201ENST00000515948 107 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 RNU6-617P-201ENST00000516147 107 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 RNU6-473P-201ENST00000516164 107 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.28□□□□□ -2.45
VAT1Q99536 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.28□□□□□ -2.45
VAT1Q99536 MIR3145-201ENST00000580727 82 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 U2.1-201ENST00000618978 145 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 AC022140.2-201ENST00000623500 188 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 MIR3688-2-201ENST00000636963 87 ntBASIC-0.28□□□□□ -2.45
VAT1Q99536 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 RNA5SP128-201ENST00000365305 116 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 SNORA40.5-201ENST00000391061 128 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 SNORD93-201ENST00000408813 74 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 AC087499.4-201ENST00000448505 178 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 RNU7-53P-201ENST00000516705 60 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 AC007751.1-201ENST00000529260 376 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 MIR4743-201ENST00000584576 69 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.29□□□□□ -2.46
VAT1Q99536 AC005357.1-201ENST00000588399 301 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 uc_338.22-201ENST00000622722 187 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 AC067863.3-201ENST00000624172 122 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.29□□□□□ -2.46
VAT1Q99536 RNU6-514P-201ENST00000384208 107 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU4-14P-201ENST00000410858 122 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU4-83P-201ENST00000410863 133 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU6-938P-201ENST00000411285 103 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU6-911P-201ENST00000516523 104 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 AC006600.1-201ENST00000572529 153 ntBASIC-0.3□□□□□ -2.46
VAT1Q99536 RNU1-29P-201ENST00000606574 126 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms