Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.64-201ENST00000362845 102 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.84-201ENST00000363011 104 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 SNORA1.2-201ENST00000365189 134 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 RNU6-1227P-201ENST00000383981 107 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 RNU6-383P-201ENST00000410864 94 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.92□□□□□ -2.26
ZNF558Q96NG5 MIR5688-201ENST00000580619 83 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 MIR6779-201ENST00000617283 64 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 AC015726.2-201ENST00000620112 122 ntBASIC0.92□□□□□ -2.26
ZNF558Q96NG5 MIR367-201ENST00000362299 68 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.11-201ENST00000362375 109 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.14-201ENST00000362415 103 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 RNU6-639P-201ENST00000384074 107 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 RNU6-662P-201ENST00000384253 104 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 MIR526A2-201ENST00000390198 65 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 BTF3P11-201ENST00000426582 477 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 AC004941.2-201ENST00000427009 228 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 AC005534.2-201ENST00000431047 433 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.91□□□□□ -2.26
ZNF558Q96NG5 FABP5P4-201ENST00000437203 171 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 RNU7-149P-201ENST00000516739 59 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 AC109810.1-201ENST00000534066 224 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 MIR4724-201ENST00000579485 89 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 AC044792.1-201ENST00000593294 196 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
ZNF558Q96NG5 Y_RNA.16-201ENST00000362421 102 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 SERF1AP1-201ENST00000514575 187 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 RNU2-13P-201ENST00000515909 113 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 RNU7-181P-201ENST00000517234 74 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 AL008718.3-201ENST00000610217 321 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 AC106800.4-201ENST00000614905 153 ntBASIC0.9□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.393-201ENST00000383936 102 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 SNORD77.4-201ENST00000516158 81 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 snoU18.1-201ENST00000629629 71 ntBASIC0.89□□□□□ -2.27
ZNF558Q96NG5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.293-201ENST00000364908 93 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 SNORA51.10-201ENST00000384418 136 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MIR570-201ENST00000384917 97 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 RNU6-613P-201ENST00000410412 108 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MTCO2P24-201ENST00000515611 426 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MIR4662B-201ENST00000579498 81 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MIR4791-201ENST00000607666 84 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 MIR6516-201ENST00000630554 81 ntBASIC0.88□□□□□ -2.27
ZNF558Q96NG5 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 MIR548O-201ENST00000408583 114 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 RNU6-847P-201ENST00000411115 108 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 RPS3AP1-201ENST00000413190 320 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.87□□□□□ -2.27
ZNF558Q96NG5 SCARNA8-201ENST00000515924 131 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 RNU7-25P-201ENST00000516544 62 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 MIR2115-201ENST00000516657 100 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 AL049861.1-201ENST00000603130 150 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.802-201ENST00000614892 130 ntBASIC0.87□□□□□ -2.27
ZNF558Q96NG5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.275-201ENST00000364726 110 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 RNU6-1109P-201ENST00000391187 107 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 AC113618.1-201ENST00000416747 285 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 MTND5P22-201ENST00000458380 195 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 RNU6-197P-201ENST00000516680 100 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 AC133485.1-201ENST00000567176 124 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
ZNF558Q96NG5 RNU6-654P-201ENST00000364373 107 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 MIR608-201ENST00000384820 100 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 MIR216A-201ENST00000385063 110 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 U7.7-201ENST00000459276 60 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.85□□□□□ -2.27
ZNF558Q96NG5 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 RNU6-126P-201ENST00000516685 103 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 DEFB108E-201ENST00000524692 240 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 RN7SL793P-201ENST00000583259 296 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 MTND1P7-201ENST00000632801 297 ntBASIC0.85□□□□□ -2.27
ZNF558Q96NG5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
ZNF558Q96NG5 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 RNU6-396P-201ENST00000365369 105 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 RNU6-211P-201ENST00000384047 107 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.422-201ENST00000384054 114 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 SNORA24-201ENST00000384096 131 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
ZNF558Q96NG5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 275.9 ms