Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.569-201ENST00000384749 103 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 MTND4P19-201ENST00000446659 478 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 RNU6-496P-201ENST00000516145 99 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 AL021707.8-201ENST00000609428 183 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 MIR7111-201ENST00000619751 72 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 AC090971.5-201ENST00000621102 293 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 AC090574.1-201ENST00000623186 233 ntBASIC0.52□□□□□ -2.33
ZNF560Q96MR9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
ZNF560Q96MR9 RNU6-934P-201ENST00000365154 107 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 RNU6-1138P-201ENST00000365359 106 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 RNU6-125P-201ENST00000384505 107 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.51□□□□□ -2.33
ZNF560Q96MR9 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 RNU7-25P-201ENST00000516544 62 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 RNU7-149P-201ENST00000516739 59 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 AC124312.5-201ENST00000604451 268 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 AC013791.1-201ENST00000616619 62 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
ZNF560Q96MR9 SNORD115-34-201ENST00000362441 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-12-201ENST00000362583 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-29-201ENST00000362834 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-9-201ENST00000362912 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-21-201ENST00000362963 81 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-14-201ENST00000363090 81 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-13-201ENST00000363358 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-41-201ENST00000363608 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-11-201ENST00000363616 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-5-201ENST00000363633 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-39-201ENST00000363694 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-4-201ENST00000363810 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-16-201ENST00000363887 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-6-201ENST00000363942 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-42-201ENST00000364273 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-15-201ENST00000364809 81 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-1-201ENST00000364961 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-26-201ENST00000365067 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-10-201ENST00000365073 81 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-43-201ENST00000365503 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-36-201ENST00000365629 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 MIR548O-201ENST00000408583 114 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.602-201ENST00000410535 92 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 MTCO1P5-201ENST00000433573 344 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.637-201ENST00000459424 114 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.715-201ENST00000517082 110 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.5□□□□□ -2.33
ZNF560Q96MR9 AL355297.3-201ENST00000604082 446 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 SNORD115-40-201ENST00000606510 82 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.5□□□□□ -2.33
ZNF560Q96MR9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ZNF560Q96MR9 RNY3P14-201ENST00000384309 102 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 RNU6-102P-201ENST00000384485 104 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 RNU6-205P-201ENST00000390858 107 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 AC087499.4-201ENST00000448505 178 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 MTND4LP30-201ENST00000454092 297 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 MRPS35P2-201ENST00000508242 191 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 RNU6-897P-201ENST00000517135 105 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.14-201ENST00000362415 103 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 SNORD42.2-201ENST00000365570 69 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.431-201ENST00000384086 102 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.645-201ENST00000391229 102 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 RNU6-383P-201ENST00000410864 94 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.48□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.639-201ENST00000458981 102 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 RNU6-397P-201ENST00000516226 104 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 RNU6-977P-201ENST00000516411 103 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 MIR5692C2-201ENST00000577959 77 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 MIR4662B-201ENST00000579498 81 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 LARP7P1-201ENST00000605576 316 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
ZNF560Q96MR9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.48□□□□□ -2.33
ZNF560Q96MR9 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 MIR520F-201ENST00000384824 87 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.581-201ENST00000391017 97 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 RNU6-823P-201ENST00000391042 103 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 MIR1252-201ENST00000408861 65 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 RNU7-67P-201ENST00000459003 62 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 snoU13.21-201ENST00000459368 105 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.721-201ENST00000517207 102 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF560Q96MR9 AC242498.1-201ENST00000604134 111 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 AC134878.1-201ENST00000619901 243 ntBASIC0.47□□□□□ -2.33
ZNF560Q96MR9 Y_RNA.241-201ENST00000364470 117 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 SNORA63C-201ENST00000364578 129 ntBASIC0.46□□□□□ -2.34
ZNF560Q96MR9 Y_RNA.494-201ENST00000384432 111 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms