Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 Y_RNA.120-201ENST00000363304 110 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 RNU6-215P-201ENST00000365169 102 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 SNORD18B-201ENST00000365659 72 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 SNORD72-201ENST00000390994 80 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 SNORA17.3-201ENST00000391159 129 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 AL049830.1-201ENST00000468034 425 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 RNU6-504P-201ENST00000516568 104 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 RNU6-126P-201ENST00000516685 103 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 AC090049.2-201ENST00000550377 109 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 AC022217.4-201ENST00000604389 163 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 snoU13.31-201ENST00000607291 104 ntBASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
VCPIP1Q96JH7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 SNORA1B-201ENST00000362535 133 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.66-201ENST00000362862 102 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 CST2P1-201ENST00000425770 87 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 RN7SKP179-201ENST00000516126 217 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 AC007751.1-201ENST00000529260 376 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 MIR3129-201ENST00000581095 76 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 AL591926.4-201ENST00000616895 298 ntBASIC1.89□□□□□ -2.11
VCPIP1Q96JH7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 MIR378A-201ENST00000362177 66 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNU6-508P-201ENST00000363231 103 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNU6-44P-201ENST00000384045 107 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 SNORA1-201ENST00000384107 130 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP127-201ENST00000411051 133 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNU7-94P-201ENST00000459576 63 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AL358944.1-201ENST00000528537 144 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 SUB1P4-201ENST00000566062 339 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 MIR3121-201ENST00000579680 77 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 MIR3618-201ENST00000580330 88 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 AC008507.4-201ENST00000585464 127 ntBASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
VCPIP1Q96JH7 SNORD68-201ENST00000363214 84 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.114-201ENST00000363265 113 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RNU6-309P-201ENST00000364573 106 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1056P-201ENST00000383996 107 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 SNORD61-201ENST00000384252 73 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 MIR515-2-201ENST00000384883 83 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 MIR515-1-201ENST00000384884 83 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AL035461.1-201ENST00000421490 332 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AL158147.1-201ENST00000443970 75 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RPS26P45-201ENST00000471748 340 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 RNU2-60P-201ENST00000517290 128 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AC024995.1-201ENST00000523014 93 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AP002004.2-201ENST00000531656 154 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 AC069114.2-201ENST00000604699 304 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
VCPIP1Q96JH7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.52-201ENST00000362760 96 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 MIR522-201ENST00000385071 87 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 MIR624-201ENST00000385217 97 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 MIR802-201ENST00000390235 94 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AL603914.1-201ENST00000401964 204 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AL606517.2-201ENST00000442855 241 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 RNU6-693P-201ENST00000516134 107 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1061P-201ENST00000516530 99 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 RNU6-919P-201ENST00000516731 104 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AC133485.4-201ENST00000561835 220 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AC138907.4-201ENST00000570107 226 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AL365205.2-201ENST00000594586 68 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VCPIP1Q96JH7 MIR337-201ENST00000362281 93 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNU6-112P-201ENST00000363599 104 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNU6-457P-201ENST00000363999 107 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNU6-296P-201ENST00000384608 107 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.563-201ENST00000384707 108 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 RNU6-772P-201ENST00000516042 105 ntBASIC1.85□□□□□ -2.11
VCPIP1Q96JH7 Y_RNA.712-201ENST00000517011 92 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms