Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MIR653-201ENST00000385279 96 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 RNU5E-9P-201ENST00000411164 104 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 RNU6-922P-201ENST00000516753 99 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 MIR3937-201ENST00000580135 106 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
CDK5RAP3Q96JB5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-886P-201ENST00000384319 105 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 MT-TR-201ENST00000387439 65 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 SNX2P2-201ENST00000424553 323 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AC107027.2-201ENST00000512197 115 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 SNORA18.7-201ENST00000516910 131 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AC007751.1-201ENST00000529260 376 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 AL442644.1-201ENST00000454390 3105 ntBASIC1.77□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-888P-201ENST00000363010 101 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.521-201ENST00000384560 114 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.555-201ENST00000384673 110 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 MIR518F-201ENST00000384973 87 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-830P-201ENST00000516353 107 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD116-25-201ENST00000516517 92 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-902P-201ENST00000517212 91 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 MIR548A2-201ENST00000384956 97 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 PCNPP3-201ENST00000393579 471 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD13-201ENST00000459299 104 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 AC005840.1-201ENST00000498412 377 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 AP000648.3-201ENST00000623539 4507 ntBASIC1.75□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD115-28-201ENST00000363931 81 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 RNU4-84P-201ENST00000364200 139 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-239P-201ENST00000390990 99 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 U8.17-201ENST00000391292 132 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 AL591806.2-201ENST00000433122 173 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD123-201ENST00000459473 70 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 RNU7-181P-201ENST00000517234 74 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 AC104465.1-201ENST00000611365 139 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 AL121890.5-201ENST00000620848 304 ntBASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-978P-201ENST00000364371 103 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.337-201ENST00000365312 102 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 SNORA1-201ENST00000384107 130 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.441-201ENST00000384123 112 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 SNORD41-201ENST00000386967 70 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 RPS27P16-201ENST00000425758 201 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 RNU4-57P-201ENST00000515980 135 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 SNORA74.3-201ENST00000517108 154 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 MIR3129-201ENST00000581095 76 ntBASIC1.73□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.272-201ENST00000364696 102 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-209P-201ENST00000384118 107 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 RNU6-1135P-201ENST00000411083 103 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 AF228730.3-201ENST00000436691 102 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 AC134878.1-201ENST00000619901 243 ntBASIC1.72□□□□□ -2.13
CDK5RAP3Q96JB5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
CDK5RAP3Q96JB5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.71□□□□□ -2.14
CDK5RAP3Q96JB5 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
CDK5RAP3Q96JB5 AL161722.3-201ENST00000605789 2983 ntBASIC1.71□□□□□ -2.14
CDK5RAP3Q96JB5 GHRLOS.1-201ENST00000610995 70 ntBASIC1.71□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.180-201ENST00000363867 113 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 SNORA25.7-201ENST00000364375 127 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.393-201ENST00000383936 102 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 RNU6-768P-201ENST00000384683 107 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 MIR548AR-201ENST00000582191 57 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 MIR7843-201ENST00000622274 79 ntBASIC1.7□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.8-201ENST00000362353 102 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 SNORA1.2-201ENST00000365189 134 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.542-201ENST00000384641 111 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 SNORD28B-201ENST00000390993 75 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 AC087499.4-201ENST00000448505 178 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 RNU6-947P-201ENST00000516264 106 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 RNU7-121P-201ENST00000516604 62 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 AP003484.1-201ENST00000530974 250 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 AL365205.2-201ENST00000594586 68 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 AL357312.1-201ENST00000603879 298 ntBASIC1.69□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.241-201ENST00000364470 117 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 Y_RNA.370-201ENST00000365589 108 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 RNU6-597P-201ENST00000365620 102 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 RNU6-1336P-201ENST00000383886 109 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 RNU6-804P-201ENST00000384286 107 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 MIR764-201ENST00000390811 85 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 SNORD77.3-201ENST00000391113 65 ntBASIC1.68□□□□□ -2.14
CDK5RAP3Q96JB5 MIR548I3-201ENST00000408378 149 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 249 ms