Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORD115-10-201ENST00000365073 81 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-43-201ENST00000365503 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-36-201ENST00000365629 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.458-201ENST00000384240 102 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD71-201ENST00000411292 86 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 RNU6-699P-201ENST00000517081 110 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 MIR3145-201ENST00000580727 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD92-201ENST00000585078 85 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 SNORD115-40-201ENST00000606510 82 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 AC011373.1-201ENST00000607270 237 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 Z97988.1-201ENST00000637697 135 ntBASIC0.09□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.160-201ENST00000363677 92 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1048P-201ENST00000364054 107 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.551-201ENST00000384661 102 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 MIR125B2-201ENST00000385128 89 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 RNU7-73P-201ENST00000458743 63 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 RNU4-77P-201ENST00000516692 156 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 AC113139.1-201ENST00000605049 239 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.772-201ENST00000606692 102 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 AC134878.1-201ENST00000619901 243 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
ECHDC3Q96DC8 FCF1P9-201ENST00000412546 282 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 RNU7-102P-201ENST00000458948 62 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AC107297.1-201ENST00000459991 176 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AL121655.1-201ENST00000605811 308 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AL021707.8-201ENST00000609428 183 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 AC092794.1-201ENST00000612734 582 ntBASIC0.07□□□□□ -2.4
ECHDC3Q96DC8 RNU4-40P-201ENST00000364351 143 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 SNORA8.2-201ENST00000384372 139 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 MIR563-201ENST00000385080 79 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 RNU6-913P-201ENST00000390913 95 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 SNORA26.5-201ENST00000391215 123 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 MIR548O-201ENST00000408583 114 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.655-201ENST00000515919 96 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 RNU6-559P-201ENST00000516151 98 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 RNU7-110P-201ENST00000516891 62 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 AC007751.1-201ENST00000529260 376 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 MIR4305-201ENST00000583252 102 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 AP000942.4-201ENST00000604811 241 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 SNORA25.18-201ENST00000607153 114 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 AC133104.2-201ENST00000615272 193 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 AC010332.2-201ENST00000613083 1904 ntBASIC0.06□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1040P-201ENST00000383974 107 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 RNU6-815P-201ENST00000384080 113 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.463-201ENST00000384271 102 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 SNORD116-29-201ENST00000384516 83 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 SNORD38B-201ENST00000384690 67 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 MT-TL1-201ENST00000386347 75 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 RNU6-938P-201ENST00000411285 103 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 snoU13.2-201ENST00000459201 104 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 RNU7-185P-201ENST00000459215 60 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1170P-201ENST00000515974 106 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 uc_338.16-201ENST00000621804 95 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 SNORD38B-202ENST00000625943 69 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
ECHDC3Q96DC8 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1138P-201ENST00000365359 106 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.383-201ENST00000383855 97 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1319P-201ENST00000390855 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-747P-201ENST00000390928 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-241P-201ENST00000391148 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU4-30P-201ENST00000410245 143 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-447P-201ENST00000410293 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-355P-201ENST00000410427 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-791P-201ENST00000410467 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-705P-201ENST00000410601 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-860P-201ENST00000410860 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU6-785P-201ENST00000411324 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 AC087499.4-201ENST00000448505 178 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RNU7-67P-201ENST00000459003 62 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 MIR3678-201ENST00000578455 94 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 RAC1P9-201ENST00000604990 392 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 U6.90-201ENST00000614007 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 U6.70-201ENST00000620287 104 ntBASIC0.04□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.241-201ENST00000364470 117 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.496-201ENST00000384444 101 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 MIR588-201ENST00000384900 83 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 SNORA40.5-201ENST00000391061 128 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 Y_RNA.587-201ENST00000391210 103 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 AC073261.1-201ENST00000429409 121 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 RNU7-149P-201ENST00000516739 59 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 RNU6-958P-201ENST00000516995 106 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms