Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.34□□□□□ -1.88
HLA-CQ95604 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-CQ95604 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-CQ95604 AC096644.4-201ENST00000563417 2912 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-CQ95604 AC245060.5-201ENST00000610778 3293 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 AC062016.1-201ENST00000355719 319 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 SNORD58A-201ENST00000383875 65 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 RNU6-1067P-201ENST00000384752 107 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 MIR1270-201ENST00000459320 83 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 RNU6-958P-201ENST00000516995 106 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 AC019288.1-201ENST00000557918 224 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 AL020996.3-201ENST00000606617 222 ntBASIC3.33□□□□□ -1.88
HLA-CQ95604 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-CQ95604 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-CQ95604 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-CQ95604 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HLA-CQ95604 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HLA-CQ95604 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
HLA-CQ95604 RNU6-787P-201ENST00000384032 107 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 Y_RNA.467-201ENST00000384297 102 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 HSPE1P9-201ENST00000440046 311 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 AC108938.1-201ENST00000451204 136 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 MIR4769-201ENST00000584126 77 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
HLA-CQ95604 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-CQ95604 SNORD15B-201ENST00000384714 146 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 RNU6-1031P-201ENST00000384773 107 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 U8.15-201ENST00000390947 134 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 RNU7-34P-201ENST00000459394 64 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 MIR4524B-201ENST00000581569 115 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
HLA-CQ95604 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-CQ95604 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-CQ95604 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-CQ95604 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-CQ95604 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-CQ95604 RNU1-70P-201ENST00000362618 164 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 SNORD38.1-201ENST00000363863 68 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 RNU6-24P-201ENST00000384440 107 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 Y_RNA.537-201ENST00000384626 109 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 MIR627-201ENST00000384979 97 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 AL513423.1-201ENST00000621695 132 ntBASIC3.3□□□□□ -1.88
HLA-CQ95604 RNU6-283P-201ENST00000364788 107 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 SNORA70B-201ENST00000384210 135 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 AL445685.2-201ENST00000422551 342 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 RNU6-857P-201ENST00000515893 110 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 RNU7-2P-201ENST00000516096 62 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 MIR5094-201ENST00000578766 85 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 AC243994.1-201ENST00000618627 109 ntBASIC3.29□□□□□ -1.88
HLA-CQ95604 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-CQ95604 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-CQ95604 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-CQ95604 RNU1-109P-201ENST00000383960 147 ntBASIC3.28□□□□□ -1.88
HLA-CQ95604 AC090844.1-201ENST00000422019 156 ntBASIC3.28□□□□□ -1.88
HLA-CQ95604 RNA5SP137-201ENST00000516833 135 ntBASIC3.28□□□□□ -1.88
HLA-CQ95604 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-CQ95604 MIR4791-201ENST00000607666 84 ntBASIC3.28□□□□□ -1.88
HLA-CQ95604 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-CQ95604 AC017071.1-201ENST00000564407 2204 ntBASIC3.28□□□□□ -1.88
HLA-CQ95604 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-CQ95604 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.89
HLA-CQ95604 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-CQ95604 MIR22-201ENST00000362190 85 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 Y_RNA.140-201ENST00000363474 103 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 Y_RNA.354-201ENST00000365448 111 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 Y_RNA.437-201ENST00000384113 113 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 MIR516B2-201ENST00000385190 85 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 snoU13.16-201ENST00000459350 104 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
HLA-CQ95604 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HLA-CQ95604 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-CQ95604 SNORD115-3-201ENST00000363100 82 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 Y_RNA.221-201ENST00000364248 96 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 RNA5SP465-201ENST00000391195 109 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 RNU1-41P-201ENST00000516161 162 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 RNU1-48P-201ENST00000516400 162 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 RNU6-267P-201ENST00000516714 103 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 RNU6-1006P-201ENST00000516998 103 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 MIR3126-201ENST00000577443 74 ntBASIC3.26□□□□□ -1.89
HLA-CQ95604 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-CQ95604 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HLA-CQ95604 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-CQ95604 AP006437.1-201ENST00000641440 3685 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-CQ95604 MIR520A-201ENST00000384862 85 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 AC104389.3-201ENST00000445629 235 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 SNORD123-201ENST00000459473 70 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 MIR376B-201ENST00000614515 100 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 AC022149.2-201ENST00000621061 203 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
HLA-CQ95604 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-CQ95604 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.24□□□□□ -1.89
HLA-CQ95604 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-CQ95604 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms