Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AP001318.4-201ENST00000616637 121 ntBASIC2.37□□□□□ -2.03
NUP43Q8NFH3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP43Q8NFH3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 SNORA51.10-201ENST00000384418 136 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 MIR759-201ENST00000390224 91 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.36□□□□□ -2.03
NUP43Q8NFH3 SNX2P2-201ENST00000424553 323 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 RNU6-998P-201ENST00000515894 101 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 RNA5SP168-201ENST00000516642 112 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 AC090821.2-201ENST00000523552 176 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 MIR4778-201ENST00000577635 80 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 MIR5009-201ENST00000578736 100 ntBASIC2.36□□□□□ -2.03
NUP43Q8NFH3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NUP43Q8NFH3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NUP43Q8NFH3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR342-201ENST00000362212 99 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-34-201ENST00000362441 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-12-201ENST00000362583 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-29-201ENST00000362834 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-9-201ENST00000362912 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-21-201ENST00000362963 81 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-14-201ENST00000363090 81 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-13-201ENST00000363358 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-41-201ENST00000363608 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-11-201ENST00000363616 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-5-201ENST00000363633 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-39-201ENST00000363694 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-4-201ENST00000363810 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-16-201ENST00000363887 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-6-201ENST00000363942 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-42-201ENST00000364273 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-15-201ENST00000364809 81 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-1-201ENST00000364961 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-26-201ENST00000365067 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-10-201ENST00000365073 81 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-43-201ENST00000365503 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-36-201ENST00000365629 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORA70B-201ENST00000384210 135 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR548D2-201ENST00000384955 97 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR518A2-201ENST00000384966 87 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 RNY4P30-201ENST00000410216 95 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 AC068339.1-201ENST00000526965 141 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR3670-2-201ENST00000582974 65 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR3670-1-201ENST00000584160 65 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR3670-3-201ENST00000584855 65 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 SNORD115-40-201ENST00000606510 82 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 MIR3670-4-201ENST00000612260 65 ntBASIC2.35□□□□□ -2.03
NUP43Q8NFH3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
NUP43Q8NFH3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP43Q8NFH3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP43Q8NFH3 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 RNU6-950P-201ENST00000384651 107 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 MIR196B-201ENST00000384852 84 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP43Q8NFH3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP43Q8NFH3 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 RNU7-96P-201ENST00000459535 64 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 SNORA72.7-201ENST00000516349 94 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 RNU7-181P-201ENST00000517234 74 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 MIR3163-201ENST00000581592 73 ntBASIC2.34□□□□□ -2.03
NUP43Q8NFH3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
NUP43Q8NFH3 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.04
NUP43Q8NFH3 RNA5SP456-201ENST00000364002 114 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 MIR504-201ENST00000385065 83 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 MIR27B-201ENST00000385129 97 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 HMGN2P39-201ENST00000398005 273 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 RNA5SP144-201ENST00000410846 116 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 AL035398.1-201ENST00000430869 322 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.33□□□□□ -2.04
NUP43Q8NFH3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 RNA5SP437-201ENST00000517249 129 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 MIR7843-201ENST00000622274 79 ntBASIC2.33□□□□□ -2.04
NUP43Q8NFH3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
NUP43Q8NFH3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUP43Q8NFH3 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
NUP43Q8NFH3 SNORA19.1-201ENST00000410656 129 ntBASIC2.32□□□□□ -2.04
NUP43Q8NFH3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.32□□□□□ -2.04
NUP43Q8NFH3 RNU7-12P-201ENST00000516030 62 ntBASIC2.32□□□□□ -2.04
NUP43Q8NFH3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.32□□□□□ -2.04
NUP43Q8NFH3 AL590808.1-201ENST00000618696 141 ntBASIC2.32□□□□□ -2.04
NUP43Q8NFH3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.32□□□□□ -2.04
NUP43Q8NFH3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NUP43Q8NFH3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NUP43Q8NFH3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NUP43Q8NFH3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NUP43Q8NFH3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
NUP43Q8NFH3 RNU6-1113P-201ENST00000384348 107 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 RNU6-296P-201ENST00000384608 107 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 MIR590-201ENST00000385008 97 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
NUP43Q8NFH3 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms