Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 SNORA1.2-201ENST00000365189 134 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.622-201ENST00000411091 108 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 AL138752.1-201ENST00000452964 351 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 RNU7-43P-201ENST00000516554 64 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 AC130289.1-201ENST00000577321 73 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU1-42P-201ENST00000364033 160 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 MIR517C-201ENST00000385103 95 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-578P-201ENST00000390980 103 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 MIR548O-201ENST00000408583 114 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 AL121914.1-201ENST00000450188 156 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 SNRPGP8-201ENST00000454064 226 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU1-98P-201ENST00000458992 160 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RN7SKP88-201ENST00000516847 250 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 SNORA18.7-201ENST00000516910 131 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-165P-201ENST00000517170 99 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 RNU2-4P-201ENST00000606190 192 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 7SK.8-201ENST00000612110 250 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 7SK.13-201ENST00000622040 250 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.82□□□□□ -2.12
PRPF38AQ8NAV1 SNORD45.3-201ENST00000363836 72 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-200P-201ENST00000364743 107 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-484P-201ENST00000384016 107 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 RNU4-43P-201ENST00000410628 137 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 SNORD123-201ENST00000459473 70 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 SNORD111.1-201ENST00000516421 86 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-197P-201ENST00000516680 100 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 MIR4308-201ENST00000580634 81 ntBASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.81□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.634-201ENST00000364811 113 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 SNORA67.6-201ENST00000391093 99 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.666-201ENST00000516187 112 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 AC109810.1-201ENST00000534066 224 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 AC097639.2-201ENST00000603159 172 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 BX248123.2-201ENST00000606318 124 ntBASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
PRPF38AQ8NAV1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.182-201ENST00000363880 111 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 MIR520C-201ENST00000385005 87 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 AC108706.1-201ENST00000611053 297 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 MIR8065-201ENST00000620577 100 ntBASIC1.79□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-888P-201ENST00000363010 101 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-997P-201ENST00000384725 107 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-918P-201ENST00000391219 106 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 U8.17-201ENST00000391292 132 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 AC087499.4-201ENST00000448505 178 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 RNU6-693P-201ENST00000516134 107 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 RNU7-25P-201ENST00000516544 62 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRPF38AQ8NAV1 Y_RNA.75-201ENST00000362927 97 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 RNU6-275P-201ENST00000364910 107 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 RNU6-321P-201ENST00000410912 106 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 AC107297.1-201ENST00000459991 176 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 RNU6-947P-201ENST00000516264 106 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 AC072026.1-201ENST00000605023 201 ntBASIC1.77□□□□□ -2.13
PRPF38AQ8NAV1 SNORD115-28-201ENST00000363931 81 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 SNORA31.24-201ENST00000517232 57 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 MIR4764-201ENST00000580680 88 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 MIR4781-201ENST00000585250 76 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 AC134878.1-201ENST00000619901 243 ntBASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.76□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 SNORD26-201ENST00000384147 75 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 SNORD61-201ENST00000384252 73 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 AC005840.1-201ENST00000498412 377 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 RNU6-138P-201ENST00000515952 107 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 RNU4-57P-201ENST00000515980 135 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 MRPS18CP4-201ENST00000535821 231 ntBASIC1.75□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 RNA5SP48-201ENST00000363969 126 ntBASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 AC009474.2-201ENST00000451383 136 ntBASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
PRPF38AQ8NAV1 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
PRPF38AQ8NAV1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRPF38AQ8NAV1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms