Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORD77B-201ENST00000391112 67 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 MIR1289-1-201ENST00000408836 144 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 SRIP3-201ENST00000413200 219 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.56□□□□□ -2
ATG4DQ86TL0 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 UBE2DNL-203ENST00000474922 222 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 AC018868.1-201ENST00000491307 315 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 AL356280.1-201ENST00000603614 379 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 AC096720.1-201ENST00000604441 183 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 RNU6-86P-201ENST00000606534 107 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 AC103810.7-201ENST00000607821 91 ntBASIC2.56□□□□□ -2
ATG4DQ86TL0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-34-201ENST00000362441 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-12-201ENST00000362583 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 RNU6-1313P-201ENST00000362622 102 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-29-201ENST00000362834 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-9-201ENST00000362912 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-21-201ENST00000362963 81 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-14-201ENST00000363090 81 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 RNU6-509P-201ENST00000363519 107 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-41-201ENST00000363608 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-11-201ENST00000363616 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-5-201ENST00000363633 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-39-201ENST00000363694 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-4-201ENST00000363810 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-6-201ENST00000363942 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-42-201ENST00000364273 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-15-201ENST00000364809 81 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-26-201ENST00000365067 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-10-201ENST00000365073 81 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-43-201ENST00000365503 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORD115-36-201ENST00000365629 82 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 SNORA32-201ENST00000384072 121 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.55□□□□□ -2
ATG4DQ86TL0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.55□□□□□ -2
ATG4DQ86TL0 STAG3L5P-204ENST00000443759 179 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.55□□□□□ -2
ATG4DQ86TL0 AC108729.3-201ENST00000513484 108 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 MIR3605-201ENST00000583214 100 ntBASIC2.55□□□□□ -2
ATG4DQ86TL0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
ATG4DQ86TL0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
ATG4DQ86TL0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.54□□□□□ -2
ATG4DQ86TL0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.54□□□□□ -2
ATG4DQ86TL0 MIR26A1-201ENST00000362205 77 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 SNORD115-2-201ENST00000362842 82 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 Y_RNA.94-201ENST00000363068 106 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 SNORA1.1-201ENST00000364671 133 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 SNORD115-20-201ENST00000365099 82 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 RNU6-443P-201ENST00000384780 107 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 MIR515-2-201ENST00000384883 83 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 MIR515-1-201ENST00000384884 83 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 RNU6-788P-201ENST00000390967 104 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 SNORD88.1-201ENST00000408684 91 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 MIR1267-201ENST00000408723 78 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
ATG4DQ86TL0 AC090844.1-201ENST00000422019 156 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 CST2P1-201ENST00000425770 87 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.54□□□□□ -2
ATG4DQ86TL0 RPL23AP94-201ENST00000512518 302 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.54□□□□□ -2
ATG4DQ86TL0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
ATG4DQ86TL0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ATG4DQ86TL0 AC005336.3-201ENST00000623833 2679 ntBASIC2.54□□□□□ -2
ATG4DQ86TL0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
ATG4DQ86TL0 SNORA22.1-201ENST00000362701 134 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 Y_RNA.316-201ENST00000365118 111 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU6-1319P-201ENST00000390855 104 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU6-747P-201ENST00000390928 104 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU6-241P-201ENST00000391148 104 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 SNORA11.2-201ENST00000408318 127 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 Y_RNA.607-201ENST00000410597 98 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU6-177P-201ENST00000411257 104 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 AC015922.2-201ENST00000435593 184 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU7-34P-201ENST00000459394 64 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 UBL5P3-201ENST00000475112 231 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 UBL5P1-201ENST00000507979 193 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 RNU6-56P-201ENST00000516986 93 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
ATG4DQ86TL0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.53□□□□□ -2
ATG4DQ86TL0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.53□□□□□ -2
ATG4DQ86TL0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
ATG4DQ86TL0 MIRLET7C-201ENST00000362160 84 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 CD24P4-201ENST00000382840 243 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 Y_RNA.430-201ENST00000384081 110 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 MIR561-201ENST00000385216 97 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 RPS12P2-201ENST00000439728 269 ntBASIC2.52□□□□□ -2.01
ATG4DQ86TL0 AC108938.1-201ENST00000451204 136 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms