Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 SCARNA17-201ENST00000516183 144 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 SNORA27.4-201ENST00000516650 95 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 uc_338.10-201ENST00000621872 182 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 AL391262.2-201ENST00000622466 494 ntBASIC-0.96□□□□□ -2.56
USP54Q70EL1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.96□□□□□ -2.56
USP54Q70EL1 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 RNU6-913P-201ENST00000390913 95 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 RNU6-248P-201ENST00000410720 107 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 AC131281.1-201ENST00000522984 164 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 AC112487.2-201ENST00000637950 304 ntBASIC-0.97□□□□□ -2.56
USP54Q70EL1 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 SNORD114-3-201ENST00000364969 75 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 U8.15-201ENST00000390947 134 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 SNORD110-201ENST00000408189 75 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 RNA5SP237-201ENST00000410414 113 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 AC023449.1-201ENST00000454464 154 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 MIR2355-201ENST00000517199 87 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 MIR4432-201ENST00000581823 84 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 AP000942.4-201ENST00000604811 241 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 MIR6738-201ENST00000619620 64 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 MIR4320-201ENST00000636981 65 ntBASIC-0.97□□□□□ -2.57
USP54Q70EL1 Y_RNA.169-201ENST00000363745 96 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 Y_RNA.373-201ENST00000365600 103 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 SNORA27-201ENST00000384323 126 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 RNY3P10-201ENST00000384764 102 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 AC244250.2-201ENST00000418731 148 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.98□□□□□ -2.57
USP54Q70EL1 AP003357.1-201ENST00000604497 148 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 AC007494.3-201ENST00000624660 743 ntBASIC-0.98□□□□□ -2.57
USP54Q70EL1 FGF7P2-201ENST00000332473 296 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 RNA5SP205-201ENST00000364653 136 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 AL603910.2-201ENST00000407268 136 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 MTATP6P17-201ENST00000431030 672 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.99□□□□□ -2.57
USP54Q70EL1 RNU7-87P-201ENST00000459343 62 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.99□□□□□ -2.57
USP54Q70EL1 ZNF519P2-201ENST00000557032 169 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 AF246928.1-201ENST00000623768 87 ntBASIC-0.99□□□□□ -2.57
USP54Q70EL1 RNA5SP192-201ENST00000364404 120 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 Y_RNA.371-201ENST00000365591 113 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 RNU6-926P-201ENST00000384075 107 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 Y_RNA.481-201ENST00000384373 102 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MIR190B-201ENST00000401119 79 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MIR876-201ENST00000401147 81 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MIR548O-201ENST00000408583 114 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MTND1P14-201ENST00000427400 950 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 RNU6-437P-201ENST00000459408 95 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 AC011352.1-201ENST00000512300 793 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MIR3672-201ENST00000584290 82 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 AC073648.5-201ENST00000603502 305 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 RNU6-1292P-201ENST00000383856 107 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 Y_RNA.456-201ENST00000384232 111 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 SNORD77.3-201ENST00000391113 65 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 SNORA3B-201ENST00000391305 131 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1□□□□□ -2.57
USP54Q70EL1 RNU7-125P-201ENST00000458760 62 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 RNU7-53P-201ENST00000516705 60 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 MIR4324-201ENST00000584846 72 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 AC245008.1-201ENST00000608123 476 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 AP001282.2-201ENST00000616149 309 ntBASIC-1□□□□□ -2.57
USP54Q70EL1 RNU6-961P-201ENST00000363893 105 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD115-28-201ENST00000363931 81 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD116-9-201ENST00000384000 95 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD116-3-201ENST00000384287 95 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD116-8-201ENST00000384365 95 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD116-7-201ENST00000384404 95 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD116-5-201ENST00000384462 95 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 SNORD12B-201ENST00000410433 91 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.01□□□□□ -2.57
USP54Q70EL1 BX276092.1-201ENST00000427368 251 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 MTCO2P19-201ENST00000427513 598 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 RNU6-470P-201ENST00000515954 104 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 RNU7-115P-201ENST00000516433 55 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 AP003072.1-201ENST00000531740 145 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 AC107308.1-201ENST00000615897 301 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 AL662814.1-201ENST00000617364 121 ntBASIC-1.01□□□□□ -2.57
USP54Q70EL1 AL596211.1-201ENST00000569873 2277 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 RNA5SP245-201ENST00000364239 121 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 SNORD72-201ENST00000390994 80 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 MTND1P27-201ENST00000451117 902 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 MTND3P7-201ENST00000474435 343 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 RNA5SP66-201ENST00000517178 101 ntBASIC-1.02□□□□□ -2.57
USP54Q70EL1 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-949P-201ENST00000384040 107 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-318P-201ENST00000384283 103 ntBASIC-1.03□□□□□ -2.57
USP54Q70EL1 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.03□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 355.3 ms