Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 SNORD115-15-201ENST00000364809 81 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-1-201ENST00000364961 82 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-26-201ENST00000365067 82 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-10-201ENST00000365073 81 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-43-201ENST00000365503 82 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-36-201ENST00000365629 82 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 RNU4-55P-201ENST00000410731 137 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 AC022028.1-201ENST00000412054 408 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SERF1AP1-201ENST00000514575 187 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 YWHAEP3-201ENST00000582767 121 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORD115-40-201ENST00000606510 82 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 SNORA69-201ENST00000383895 132 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 RNA5SP237-201ENST00000410414 113 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 AC064836.2-201ENST00000609491 462 ntBASIC-1.82□□□□□ -2.7
UBR3Q6ZT12 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 RNU6-224P-201ENST00000384055 107 ntBASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 AC005771.1-201ENST00000585581 349 ntBASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 AC087752.4-201ENST00000605911 462 ntBASIC-1.83□□□□□ -2.7
UBR3Q6ZT12 RNA5SP403-201ENST00000363598 108 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 SNORD115-32-201ENST00000364079 82 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 RNU1-141P-201ENST00000364623 158 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 RNA5SP475-201ENST00000410568 110 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 Z82188.1-201ENST00000436709 154 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 AC072046.2-201ENST00000618366 268 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 MIR147A-201ENST00000385079 72 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 SNORA40.5-201ENST00000391061 128 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 AP003181.2-201ENST00000528941 181 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 SCOCP1-201ENST00000554676 349 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 POLR3GP2-201ENST00000588366 668 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 JPX_2.1-201ENST00000614161 69 ntBASIC-1.84□□□□□ -2.7
UBR3Q6ZT12 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 MIR548K-201ENST00000408406 116 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 RNU6-325P-201ENST00000411132 105 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 RNU6-531P-201ENST00000516694 104 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 MTCO3P23-201ENST00000561363 289 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 PIGPP4-201ENST00000584447 307 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 AC091931.1-201ENST00000623488 728 ntBASIC-1.85□□□□□ -2.71
UBR3Q6ZT12 MIR410-201ENST00000362222 80 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 SNORD18.1-201ENST00000363807 70 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 RNU6-966P-201ENST00000516479 104 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 MIR1-2-201ENST00000384961 85 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 AC008507.2-201ENST00000588402 1176 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 AL158050.2-201ENST00000605336 568 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 AC006927.2-201ENST00000639256 389 ntBASIC-1.86□□□□□ -2.71
UBR3Q6ZT12 RNU4-75P-201ENST00000364621 146 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 RNU6-154P-201ENST00000384306 106 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 AC100767.1-201ENST00000528178 123 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 YWHAEP2-201ENST00000580066 112 ntBASIC-1.87□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RNU6-449P-201ENST00000383914 107 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AL603914.1-201ENST00000401964 204 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 MRPL42P2-201ENST00000403169 426 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RPS27AP14-201ENST00000422868 454 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AL031667.1-201ENST00000440222 725 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 MTND1P27-201ENST00000451117 902 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AC104576.1-201ENST00000524225 88 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AL353803.5-201ENST00000599815 141 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AC092807.2-201ENST00000609367 243 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 SNORA72-201ENST00000384339 132 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RNU2-9P-201ENST00000410194 145 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 RNU7-74P-201ENST00000459104 62 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 MIR5188-201ENST00000583467 113 ntBASIC-1.88□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 RNU6-597P-201ENST00000365620 102 ntBASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 AC116353.3-201ENST00000511215 249 ntBASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 MTATP6P15-201ENST00000527233 835 ntBASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 AC005972.2-201ENST00000604690 348 ntBASIC-1.89□□□□□ -2.71
UBR3Q6ZT12 RNU6-479P-201ENST00000516348 105 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 AC008536.2-201ENST00000607284 349 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 RNY1P12-201ENST00000364251 105 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 SNORA26.6-201ENST00000391256 115 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 MIR548O-201ENST00000408583 114 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 SNORD2-201ENST00000459163 69 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 AL137161.1-201ENST00000532231 390 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 AL442663.2-201ENST00000554385 511 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 MIR5704-201ENST00000584029 77 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 AC008507.4-201ENST00000585464 127 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.9□□□□□ -2.71
UBR3Q6ZT12 RNU6-281P-201ENST00000384212 103 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms