Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 PGBD4P5-201ENST00000445958 426 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 RNU7-34P-201ENST00000459394 64 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 RNU7-12P-201ENST00000516030 62 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 RNA5SP458-201ENST00000516188 119 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-659P-201ENST00000516454 104 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 AC021506.2-201ENST00000612354 169 ntBASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RUFY4Q6ZNE9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-647P-201ENST00000364243 107 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.563-201ENST00000384707 108 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 MIR452-201ENST00000385020 85 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.629-201ENST00000411368 105 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 AC015922.2-201ENST00000435593 184 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 AL158147.1-201ENST00000443970 75 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 RNA5SP236-201ENST00000516169 116 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-1234P-201ENST00000516877 103 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RUFY4Q6ZNE9 MTND5P32-201ENST00000560711 1802 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-834P-201ENST00000362367 110 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 RNA5SP99-201ENST00000364020 114 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 RNA5SP37-201ENST00000365420 130 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 AC104435.1-201ENST00000483483 166 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 SCARNA15-202ENST00000516881 127 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.712-201ENST00000517011 92 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 AL359881.1-201ENST00000602916 267 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
RUFY4Q6ZNE9 MIR424-201ENST00000362227 98 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.114-201ENST00000363265 113 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 MIR660-201ENST00000385235 97 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 AL627390.1-201ENST00000396055 340 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 AL603825.1-201ENST00000438481 80 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-1149P-201ENST00000516810 97 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 AC015726.2-201ENST00000620112 122 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 MIR203B-201ENST00000636080 86 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
RUFY4Q6ZNE9 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 RNU6-309P-201ENST00000364573 106 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 Y_RNA.273-201ENST00000364703 102 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AC011753.1-201ENST00000451001 220 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AL021397.1-201ENST00000451806 248 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AC099513.1-201ENST00000490423 301 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AP003484.1-201ENST00000530974 250 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AL022345.2-201ENST00000606307 135 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 AC092881.1-201ENST00000638218 2733 ntBASIC2.41□□□□□ -2.02
RUFY4Q6ZNE9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RUFY4Q6ZNE9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
RUFY4Q6ZNE9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.261-201ENST00000364631 102 ntBASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 SNORA31.17-201ENST00000516953 127 ntBASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 AC009831.4-201ENST00000620744 325 ntBASIC2.4□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 SNORA2.2-201ENST00000365473 135 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 SNORA40.5-201ENST00000391061 128 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-938P-201ENST00000411285 103 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 RNU7-80P-201ENST00000459562 61 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 AC090255.1-201ENST00000495779 349 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 RNA5SP200-201ENST00000516360 103 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
RUFY4Q6ZNE9 RNU6-1290P-201ENST00000362957 109 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 MIR136-201ENST00000385207 82 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.617-201ENST00000410920 90 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.651-201ENST00000459380 103 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 SNORD3E-202ENST00000627253 216 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 MIR376A2-201ENST00000636782 80 ntBASIC2.38□□□□□ -2.03
RUFY4Q6ZNE9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-34-201ENST00000362441 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-12-201ENST00000362583 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-29-201ENST00000362834 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-9-201ENST00000362912 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-21-201ENST00000362963 81 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-14-201ENST00000363090 81 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-13-201ENST00000363358 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-41-201ENST00000363608 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-11-201ENST00000363616 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-5-201ENST00000363633 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-39-201ENST00000363694 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-4-201ENST00000363810 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-16-201ENST00000363887 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-6-201ENST00000363942 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-42-201ENST00000364273 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-15-201ENST00000364809 81 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-1-201ENST00000364961 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-26-201ENST00000365067 82 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORD115-10-201ENST00000365073 81 ntBASIC2.37□□□□□ -2.03
RUFY4Q6ZNE9 SNORA1.2-201ENST00000365189 134 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms