Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC006441.5-201ENST00000612680 209 ntBASIC0.98□□□□□ -2.25
RFWD3Q6PCD5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
RFWD3Q6PCD5 MIR373-201ENST00000362273 69 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNU4-10P-201ENST00000364383 140 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 Y_RNA.288-201ENST00000364854 92 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNU6-1138P-201ENST00000365359 106 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 MIR626-201ENST00000385032 94 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNU6-651P-201ENST00000411040 105 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 AC245047.8-201ENST00000456455 284 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 SNORD127-201ENST00000458892 86 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 AC048334.1-201ENST00000477975 159 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 SNORA31.4-201ENST00000516049 129 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNU7-43P-201ENST00000516554 64 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 RNA5SP404-201ENST00000517118 132 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 MIR4282-201ENST00000583613 67 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 AC012433.1-201ENST00000588916 398 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 AL049861.1-201ENST00000603130 150 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 Pinc.1-201ENST00000616452 154 ntBASIC0.97□□□□□ -2.25
RFWD3Q6PCD5 Y_RNA.24-201ENST00000362508 103 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 MIR520C-201ENST00000385005 87 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 RPS29P1-201ENST00000465274 159 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 SNORD77.4-201ENST00000516158 81 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 MIR4764-201ENST00000580680 88 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.96□□□□□ -2.26
RFWD3Q6PCD5 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 MIR568-201ENST00000385036 95 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 RNU6-910P-201ENST00000390844 107 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 RNU2-38P-201ENST00000410856 79 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 RN7SKP164-201ENST00000516138 266 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 SNORA70.22-201ENST00000517160 124 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 AC100767.1-201ENST00000528178 123 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 MIR4662B-201ENST00000579498 81 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 MIR3192-201ENST00000584920 77 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 AL022345.2-201ENST00000606307 135 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 AL391903.3-201ENST00000612158 163 ntBASIC0.95□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.304-201ENST00000365011 112 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.572-201ENST00000384757 98 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 MIR548H3-201ENST00000408771 118 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 snoU13.25-201ENST00000458945 104 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 snoU13.18-201ENST00000459483 104 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 UBL5P1-201ENST00000507979 193 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.668-201ENST00000516233 93 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 AC015726.2-201ENST00000620112 122 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 U8.17-201ENST00000391292 132 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 MTND3P2-201ENST00000438452 342 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 AL118496.2-201ENST00000448300 230 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 RNU7-41P-201ENST00000515917 61 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 RNU6-126P-201ENST00000516685 103 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 MIR4643-201ENST00000577473 78 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 MIR548AR-201ENST00000582191 57 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 AL365265.1-201ENST00000621045 234 ntBASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.93□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 RNA5SP48-201ENST00000363969 126 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 SNORD12-201ENST00000391002 90 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 RNU4-57P-201ENST00000515980 135 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 SNORD79.1-201ENST00000516069 84 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 SNORD116-28-201ENST00000516123 91 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 RNU7-25P-201ENST00000516544 62 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 AL078603.1-201ENST00000603824 313 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 AC008133.2-201ENST00000624540 351 ntBASIC0.92□□□□□ -2.26
RFWD3Q6PCD5 SNORA1.2-201ENST00000365189 134 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.416-201ENST00000384014 113 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 RNY3P5-201ENST00000384127 102 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 RNU6-1067P-201ENST00000384752 107 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 SNORD28B-201ENST00000390993 75 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 MIR548O-201ENST00000408583 114 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 RNU2-55P-201ENST00000411146 174 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 AL442067.1-201ENST00000613261 223 ntBASIC0.91□□□□□ -2.26
RFWD3Q6PCD5 U4.1-201ENST00000620349 87 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms