Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 MIR5087-201ENST00000635826 76 ntBASIC0.39□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.136-201ENST00000363444 102 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.303-201ENST00000364998 94 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 AC015818.7-201ENST00000428754 109 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 AC087499.7-201ENST00000441958 109 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 AC007485.1-201ENST00000616755 206 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 AC112487.2-201ENST00000637950 304 ntBASIC0.38□□□□□ -2.35
NIPAL3Q6P499 MIR367-201ENST00000362299 68 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-34-201ENST00000362441 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-12-201ENST00000362583 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-29-201ENST00000362834 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-9-201ENST00000362912 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-21-201ENST00000362963 81 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-14-201ENST00000363090 81 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-13-201ENST00000363358 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-41-201ENST00000363608 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-11-201ENST00000363616 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-5-201ENST00000363633 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-39-201ENST00000363694 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-4-201ENST00000363810 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-16-201ENST00000363887 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-6-201ENST00000363942 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-42-201ENST00000364273 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORA63C-201ENST00000364578 129 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-15-201ENST00000364809 81 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-1-201ENST00000364961 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-26-201ENST00000365067 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-10-201ENST00000365073 81 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-43-201ENST00000365503 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-36-201ENST00000365629 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORA24-201ENST00000384096 131 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.445-201ENST00000384168 102 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.569-201ENST00000384749 103 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 RNA5SP496-201ENST00000391240 109 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 RNU6-383P-201ENST00000410864 94 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 MRPS35P2-201ENST00000508242 191 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 RNA5SP436-201ENST00000516020 115 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.37□□□□□ -2.35
NIPAL3Q6P499 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 MIR4804-201ENST00000581683 73 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 MIR4676-201ENST00000583078 72 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 AL049861.1-201ENST00000603130 150 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 C8orf59P2-201ENST00000603441 271 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 LARP7P1-201ENST00000605576 316 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 AL162730.1-201ENST00000605734 292 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 SNORD115-40-201ENST00000606510 82 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.37□□□□□ -2.35
NIPAL3Q6P499 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 RNU4-90P-201ENST00000362773 141 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.354-201ENST00000365448 111 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 SNORA63.7-201ENST00000365579 123 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
NIPAL3Q6P499 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 MTCO2P12-201ENST00000427426 682 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 MTND5P20-201ENST00000448677 143 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.36□□□□□ -2.35
NIPAL3Q6P499 HSPE1P25-201ENST00000455484 251 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.36□□□□□ -2.35
NIPAL3Q6P499 RNU6-507P-201ENST00000516045 100 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.666-201ENST00000516187 112 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 RNU6-397P-201ENST00000516226 104 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 RNU6-958P-201ENST00000516995 106 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 AC013791.1-201ENST00000616619 62 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 AC090574.1-201ENST00000623186 233 ntBASIC0.36□□□□□ -2.35
NIPAL3Q6P499 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.112-201ENST00000363250 102 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 SNORD115-28-201ENST00000363931 81 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 RNU6-1138P-201ENST00000365359 106 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 RNU6-102P-201ENST00000384485 104 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 SNORD38B-201ENST00000384690 67 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 MIR936-201ENST00000401264 98 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.35□□□□□ -2.35
NIPAL3Q6P499 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 AC087499.4-201ENST00000448505 178 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 RNU6-496P-201ENST00000516145 99 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.702-201ENST00000516843 96 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 AC124312.5-201ENST00000604451 268 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 SNORD38B-202ENST00000625943 69 ntBASIC0.35□□□□□ -2.35
NIPAL3Q6P499 Y_RNA.183-201ENST00000363882 113 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.269-201ENST00000364685 89 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.494-201ENST00000384432 111 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 RNU6-342P-201ENST00000384521 104 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
NIPAL3Q6P499 MTCO1P5-201ENST00000433573 344 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
NIPAL3Q6P499 MTND3P22-201ENST00000510932 243 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 SNORA18.4-201ENST00000516440 124 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 MIR4711-201ENST00000578274 70 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 MIR4724-201ENST00000579485 89 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 MIR4662B-201ENST00000579498 81 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 AP000942.4-201ENST00000604811 241 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 AL021707.8-201ENST00000609428 183 ntBASIC0.34□□□□□ -2.36
NIPAL3Q6P499 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
NIPAL3Q6P499 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.33□□□□□ -2.36
NIPAL3Q6P499 Y_RNA.293-201ENST00000364908 93 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms