Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SNORD115-21-201ENST00000362963 81 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-14-201ENST00000363090 81 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-13-201ENST00000363358 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-41-201ENST00000363608 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-11-201ENST00000363616 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-5-201ENST00000363633 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-39-201ENST00000363694 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-4-201ENST00000363810 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-16-201ENST00000363887 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-6-201ENST00000363942 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP456-201ENST00000364002 114 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-42-201ENST00000364273 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-15-201ENST00000364809 81 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-1-201ENST00000364961 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.309-201ENST00000365046 111 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-26-201ENST00000365067 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-10-201ENST00000365073 81 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-43-201ENST00000365503 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-36-201ENST00000365629 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 RPS29P24-201ENST00000486345 171 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR4709-201ENST00000577272 72 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD115-40-201ENST00000606510 82 ntBASIC2.3□□□□□ -2.04
HLA-DQA1Q5Y7H0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR302B-201ENST00000362188 73 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.163-201ENST00000363702 113 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU6-1014P-201ENST00000383940 103 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU1-109P-201ENST00000383960 147 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP492-201ENST00000411330 114 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RPS12P2-201ENST00000439728 269 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU2-11P-201ENST00000459191 187 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 snoU13.27-201ENST00000459278 104 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU7-45P-201ENST00000459460 63 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU7-96P-201ENST00000459535 64 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RPL39P34-201ENST00000477141 156 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC099513.1-201ENST00000490423 301 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNA5SP24-201ENST00000516478 95 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3683-201ENST00000580847 82 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3670-2-201ENST00000582974 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3670-1-201ENST00000584160 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3670-3-201ENST00000584855 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR6852-201ENST00000621699 66 ntBASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.28□□□□□ -2.04
HLA-DQA1Q5Y7H0 MIR452-201ENST00000385020 85 ntBASIC2.28□□□□□ -2.04
HLA-DQA1Q5Y7H0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
HLA-DQA1Q5Y7H0 AL035398.1-201ENST00000430869 322 ntBASIC2.28□□□□□ -2.04
HLA-DQA1Q5Y7H0 AC106754.2-201ENST00000623006 233 ntBASIC2.28□□□□□ -2.04
HLA-DQA1Q5Y7H0 Y_RNA.49-201ENST00000362714 112 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.370-201ENST00000365589 108 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-756P-201ENST00000383997 107 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR526A1-201ENST00000384897 85 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR136-201ENST00000385207 82 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR1302-5-201ENST00000408164 150 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP144-201ENST00000410846 116 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP100-201ENST00000410903 110 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP59-201ENST00000410922 110 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.677-201ENST00000516401 85 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-537P-201ENST00000517277 103 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC092881.1-201ENST00000638218 2733 ntBASIC2.27□□□□□ -2.05
HLA-DQA1Q5Y7H0 U8.6-201ENST00000364939 135 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.328-201ENST00000365208 113 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA51.5-201ENST00000384126 131 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL359511.1-201ENST00000402970 211 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP450-201ENST00000411206 102 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RN7SKP192-201ENST00000411291 327 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL512326.2-201ENST00000426359 151 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 PGBD4P5-201ENST00000445958 426 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC107297.1-201ENST00000459991 176 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 UBL5P3-201ENST00000475112 231 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNA5SP481-201ENST00000516814 122 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU7-6P-201ENST00000516845 62 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-958P-201ENST00000516995 106 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 IGKV3-31-201ENST00000523109 329 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 MIR548AR-201ENST00000582191 57 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-94P-201ENST00000607728 107 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 AL513423.1-201ENST00000621695 132 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 AC021613.1-201ENST00000623880 111 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORD3E-202ENST00000627253 216 ntBASIC2.26□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU6-766P-201ENST00000362478 107 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 SNORA1.2-201ENST00000365189 134 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 RNU1-51P-201ENST00000365345 176 ntBASIC2.25□□□□□ -2.05
HLA-DQA1Q5Y7H0 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 356 ms