Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 RNU7-181P-201ENST00000517234 74 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 SNORA81.3-201ENST00000517283 198 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 AC007751.1-201ENST00000529260 376 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 MIR548AR-201ENST00000582191 57 ntBASIC1.6□□□□□ -2.15
RNF220Q5VTB9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.6□□□□□ -2.15
RNF220Q5VTB9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.6□□□□□ -2.15
RNF220Q5VTB9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
RNF220Q5VTB9 RNU6-312P-201ENST00000364629 107 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 MIR583-201ENST00000384846 75 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 MIR548A2-201ENST00000384956 97 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 MTND5P15-201ENST00000434246 349 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 UBL5P3-201ENST00000475112 231 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 AC022559.1-201ENST00000520905 205 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 AC134878.1-201ENST00000619901 243 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 MIR8065-201ENST00000620577 100 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
RNF220Q5VTB9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.58□□□□□ -2.16
RNF220Q5VTB9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
RNF220Q5VTB9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.58□□□□□ -2.16
RNF220Q5VTB9 MIR378D2-201ENST00000580636 98 ntBASIC1.58□□□□□ -2.16
RNF220Q5VTB9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RNF220Q5VTB9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
RNF220Q5VTB9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 RNU6-643P-201ENST00000384018 107 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 SNORD28B-201ENST00000390993 75 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 RNU7-120P-201ENST00000459334 63 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 AC107297.1-201ENST00000459991 176 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 RNU6-1219P-201ENST00000516143 112 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 SNORD116-25-201ENST00000516517 92 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 MIR4431-201ENST00000579990 94 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 AL096861.1-201ENST00000610899 123 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.57□□□□□ -2.16
RNF220Q5VTB9 AC084768.2-201ENST00000622736 221 ntBASIC1.57□□□□□ -2.16
RNF220Q5VTB9 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.56□□□□□ -2.16
RNF220Q5VTB9 AC108059.2-201ENST00000434626 151 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 AL133373.1-201ENST00000497098 94 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 AC004792.1-201ENST00000614523 137 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 MIR7843-201ENST00000622274 79 ntBASIC1.56□□□□□ -2.16
RNF220Q5VTB9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 MIR504-201ENST00000385065 83 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 AF228730.3-201ENST00000436691 102 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 RNU6-182P-201ENST00000516970 105 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 MIR3192-201ENST00000584920 77 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 AC008133.2-201ENST00000624540 351 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
RNF220Q5VTB9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
RNF220Q5VTB9 SNORD115-34-201ENST00000362441 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-12-201ENST00000362583 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-29-201ENST00000362834 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-9-201ENST00000362912 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-21-201ENST00000362963 81 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-14-201ENST00000363090 81 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-13-201ENST00000363358 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-41-201ENST00000363608 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-11-201ENST00000363616 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-5-201ENST00000363633 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-39-201ENST00000363694 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-4-201ENST00000363810 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-16-201ENST00000363887 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-6-201ENST00000363942 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-42-201ENST00000364273 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-15-201ENST00000364809 81 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-1-201ENST00000364961 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-26-201ENST00000365067 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-10-201ENST00000365073 81 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-43-201ENST00000365503 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-36-201ENST00000365629 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.54□□□□□ -2.16
RNF220Q5VTB9 AC006461.1-201ENST00000412637 326 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 RNU7-41P-201ENST00000515917 61 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 AP003484.1-201ENST00000530974 250 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RNF220Q5VTB9 SNORD115-40-201ENST00000606510 82 ntBASIC1.54□□□□□ -2.16
RNF220Q5VTB9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RNF220Q5VTB9 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
RNF220Q5VTB9 SNORA40.5-201ENST00000391061 128 ntBASIC1.53□□□□□ -2.16
RNF220Q5VTB9 RNU6-938P-201ENST00000411285 103 ntBASIC1.53□□□□□ -2.16
RNF220Q5VTB9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.53□□□□□ -2.16
RNF220Q5VTB9 MIR6845-201ENST00000613182 61 ntBASIC1.53□□□□□ -2.16
RNF220Q5VTB9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.53□□□□□ -2.16
RNF220Q5VTB9 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 RNA5SP48-201ENST00000363969 126 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 RNU6-978P-201ENST00000364371 103 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 SNORA1-201ENST00000384107 130 ntBASIC1.52□□□□□ -2.17
RNF220Q5VTB9 SNORA51.10-201ENST00000384418 136 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms