Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-1019P-201ENST00000364424 107 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 SNORD45A-201ENST00000384512 84 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 MIR548U-201ENST00000390728 81 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 SNORD90-201ENST00000391145 111 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 ARF4P2-201ENST00000430209 526 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 RNU6-850P-201ENST00000516934 103 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.75□□□□□ -1.81
VARS2Q5ST30 AC090897.1-201ENST00000580909 226 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 AL356280.1-201ENST00000603614 379 ntBASIC3.75□□□□□ -1.81
VARS2Q5ST30 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VARS2Q5ST30 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VARS2Q5ST30 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VARS2Q5ST30 RNU6-862P-201ENST00000362804 105 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 RNY1P2-201ENST00000364820 117 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 RNY1P13-201ENST00000365030 105 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 SNORD28B-201ENST00000390993 75 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 RN7SL330P-201ENST00000469709 307 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 AC133485.1-201ENST00000567176 124 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 MIR548AR-201ENST00000582191 57 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 AL357312.1-201ENST00000603879 298 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 U7.8-201ENST00000619968 63 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 U6.98-201ENST00000637157 84 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 AC093908.1-201ENST00000623125 8092 ntBASIC3.74□□□□□ -1.81
VARS2Q5ST30 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
VARS2Q5ST30 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VARS2Q5ST30 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
VARS2Q5ST30 RNU1-105P-201ENST00000363470 161 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 RNU6-291P-201ENST00000384720 107 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 U8.16-201ENST00000391279 133 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 AC093850.1-201ENST00000454121 251 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 snoU13.16-201ENST00000459350 104 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 RNU2-27P-201ENST00000516185 142 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 Y_RNA.722-201ENST00000517279 114 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 EIF4BP1-201ENST00000554881 351 ntBASIC3.73□□□□□ -1.81
VARS2Q5ST30 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VARS2Q5ST30 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VARS2Q5ST30 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 MIR337-201ENST00000362281 93 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 SNORD116-24-201ENST00000384549 92 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 MIR136-201ENST00000385207 82 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.72□□□□□ -1.81
VARS2Q5ST30 RPL23AP6-201ENST00000446637 472 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.72□□□□□ -1.81
VARS2Q5ST30 RNU6-881P-201ENST00000516813 102 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 SNORD92-201ENST00000585078 85 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 MIR5739-201ENST00000619803 80 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 AC022149.2-201ENST00000621061 203 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 Z97988.1-201ENST00000637697 135 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VARS2Q5ST30 AL355596.1-201ENST00000565399 3996 ntBASIC3.72□□□□□ -1.81
VARS2Q5ST30 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.72□□□□□ -1.81
VARS2Q5ST30 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VARS2Q5ST30 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VARS2Q5ST30 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
VARS2Q5ST30 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.81
VARS2Q5ST30 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VARS2Q5ST30 RNA5SP42-201ENST00000364278 115 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 Y_RNA.283-201ENST00000364798 112 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 Y_RNA.537-201ENST00000384626 109 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 MIR452-201ENST00000385020 85 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 MICF-203ENST00000432679 129 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 RN7SL594P-201ENST00000470590 287 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 SNORA48.11-201ENST00000517015 89 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 IGKV2-26-201ENST00000518305 343 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 MIR3186-201ENST00000577404 85 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 AC069114.2-201ENST00000604699 304 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 AC244205.2-202ENST00000635781 342 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VARS2Q5ST30 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.71□□□□□ -1.82
VARS2Q5ST30 Z83843.1-201ENST00000604070 3685 ntBASIC3.71□□□□□ -1.82
VARS2Q5ST30 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
VARS2Q5ST30 RNU6-571P-201ENST00000384128 107 ntBASIC3.7□□□□□ -1.82
VARS2Q5ST30 RNU2-7P-201ENST00000410794 178 ntBASIC3.7□□□□□ -1.82
VARS2Q5ST30 COTL1P1-201ENST00000422309 375 ntBASIC3.7□□□□□ -1.82
VARS2Q5ST30 snoU13.17-201ENST00000458802 104 ntBASIC3.7□□□□□ -1.82
VARS2Q5ST30 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
VARS2Q5ST30 MIR4325-201ENST00000583049 90 ntBASIC3.7□□□□□ -1.82
VARS2Q5ST30 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
VARS2Q5ST30 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VARS2Q5ST30 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
VARS2Q5ST30 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VARS2Q5ST30 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
VARS2Q5ST30 RNU6-340P-201ENST00000364005 107 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 RNU6-301P-201ENST00000384277 107 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 FO393413.1-201ENST00000402892 195 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 SNORA31.10-201ENST00000516482 106 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 MIR3675-201ENST00000583661 73 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
VARS2Q5ST30 MIR8053-201ENST00000613344 75 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 AC069503.3-201ENST00000618674 145 ntBASIC3.69□□□□□ -1.82
VARS2Q5ST30 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.69□□□□□ -1.82
VARS2Q5ST30 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms