Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 MIR891A-201ENST00000401237 79 ntBASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 RNU5E-3P-201ENST00000515913 68 ntBASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 DEFB122-202ENST00000569013 197 ntBASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 SNORD3E-202ENST00000627253 216 ntBASIC2.1□□□□□ -2.07
CCDC178Q5BJE1 RNU6-888P-201ENST00000363010 101 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 SNORD24-201ENST00000383884 75 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 SNORD38C-201ENST00000384381 69 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 Y_RNA.542-201ENST00000384641 111 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 MIR518F-201ENST00000384973 87 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 MIR516B2-201ENST00000385190 85 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 AC003989.2-201ENST00000440224 169 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 RNU7-197P-201ENST00000458836 62 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 RN7SL274P-201ENST00000492268 272 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 MIR4255-201ENST00000579351 72 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 AC011603.4-201ENST00000611325 277 ntBASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC178Q5BJE1 RNU6-915P-201ENST00000364943 103 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.586-201ENST00000391146 98 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 RNA5SP127-201ENST00000411051 133 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 MTND4LP9-201ENST00000427694 174 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 AF228730.3-201ENST00000436691 102 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 PGBD4P5-201ENST00000445958 426 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 snoU13.23-201ENST00000458863 104 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 RNU6-1211P-201ENST00000459179 105 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 AC099513.1-201ENST00000490423 301 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 AP001328.1-201ENST00000528550 176 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 MIR4419B-201ENST00000577260 68 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 AC006441.5-201ENST00000612680 209 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
CCDC178Q5BJE1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 U8.1-201ENST00000362843 134 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 RNU6-439P-201ENST00000384188 106 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 RPS29P11-201ENST00000496507 171 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 RNU6-971P-201ENST00000516920 106 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 MIR3618-201ENST00000580330 88 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 AC027279.3-201ENST00000625055 122 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 AC008555.8-201ENST00000623602 2168 ntBASIC2.07□□□□□ -2.08
CCDC178Q5BJE1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 SNORD115-28-201ENST00000363931 81 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 SNORD18B-201ENST00000365659 72 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AL591806.2-201ENST00000433122 173 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 SNRPGP14-201ENST00000435400 219 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AC015922.2-201ENST00000435593 184 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.686-201ENST00000516548 134 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 RNU6-250P-201ENST00000516958 103 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 MIR4524B-201ENST00000581569 115 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AC131055.1-201ENST00000584626 316 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 AL365205.2-201ENST00000594586 68 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.06□□□□□ -2.08
CCDC178Q5BJE1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 RNU6-833P-201ENST00000363486 107 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.251-201ENST00000364551 99 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 MIR660-201ENST00000385235 97 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 SNORD77.3-201ENST00000391113 65 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 RNU6-548P-201ENST00000517083 115 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 MIR3683-201ENST00000580847 82 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 AL513423.1-201ENST00000621695 132 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 AC106754.2-201ENST00000623006 233 ntBASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.52-201ENST00000362760 96 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.294-201ENST00000364916 102 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 RNU6-203P-201ENST00000384038 104 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 SUMO2P16-201ENST00000519475 264 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 AC134878.1-201ENST00000619901 243 ntBASIC2.04□□□□□ -2.08
CCDC178Q5BJE1 Y_RNA.37-201ENST00000362606 108 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 RNU6-414P-201ENST00000363705 104 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 MIR624-201ENST00000385217 97 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 RNU6-360P-201ENST00000390944 104 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 RNA5SP212-201ENST00000391223 107 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 SNORD36C-201ENST00000516733 66 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 MIR4769-201ENST00000584126 77 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.03□□□□□ -2.08
CCDC178Q5BJE1 MTND5P32-201ENST00000560711 1802 ntBASIC2.03□□□□□ -2.09
CCDC178Q5BJE1 MIR424-201ENST00000362227 98 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 MIR452-201ENST00000385020 85 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 AC244636.1-201ENST00000421152 228 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 Y_RNA.690-201ENST00000516603 95 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 RNU7-181P-201ENST00000517234 74 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 AC015712.3-201ENST00000559380 164 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 MIR3122-201ENST00000577243 73 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 AL773524.1-201ENST00000614065 229 ntBASIC2.02□□□□□ -2.09
CCDC178Q5BJE1 TUG1_4.1-201ENST00000619464 181 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms