Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 Y_RNA.602-201ENST00000410535 92 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 MTND4P19-201ENST00000446659 478 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 AC113410.1-201ENST00000505029 247 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RNU6-191P-201ENST00000516295 94 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RNU6-94P-201ENST00000607728 107 ntBASIC0.67□□□□□ -2.3
LRIT3Q3SXY7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.183-201ENST00000363882 113 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.222-201ENST00000364264 102 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.813-201ENST00000364639 102 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 RNU6-396P-201ENST00000365369 105 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 RNU6-144P-201ENST00000383951 107 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 Y_RNA.537-201ENST00000384626 109 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 MIR570-201ENST00000384917 97 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 SNORD72-201ENST00000390994 80 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 SNORA26.5-201ENST00000391215 123 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 SNORD11-201ENST00000459124 84 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 RNU6-397P-201ENST00000516226 104 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 MIR4300-201ENST00000581016 96 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 AC006441.5-201ENST00000612680 209 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 MIR6516-201ENST00000630554 81 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 MIR6759-201ENST00000638110 65 ntBASIC0.66□□□□□ -2.3
LRIT3Q3SXY7 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 SNORA2B-201ENST00000384583 137 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.569-201ENST00000384749 103 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 RNU6-101P-201ENST00000410323 104 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.715-201ENST00000517082 110 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.721-201ENST00000517207 102 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 RNU7-181P-201ENST00000517234 74 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 AC023932.2-201ENST00000603176 175 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 LARP7P1-201ENST00000605576 316 ntBASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.65□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 RNU6-654P-201ENST00000364373 107 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.418-201ENST00000384029 102 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 MIR329-2-201ENST00000385029 84 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 MIR1302-7-201ENST00000408841 72 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 RNU6-613P-201ENST00000410412 108 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 RNU6-847P-201ENST00000411115 108 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 MTND4LP30-201ENST00000454092 297 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 RNU6-764P-201ENST00000516396 105 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 AC012433.1-201ENST00000588916 398 ntBASIC0.64□□□□□ -2.31
LRIT3Q3SXY7 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.14-201ENST00000362415 103 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.389-201ENST00000383924 113 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 RNU6-308P-201ENST00000390957 107 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 SNORD115-46-201ENST00000390982 71 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 AL603910.2-201ENST00000407268 136 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.639-201ENST00000458981 102 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 AC107297.1-201ENST00000459991 176 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 RNU6-897P-201ENST00000517135 105 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 C8orf59P2-201ENST00000603441 271 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 AC037487.3-201ENST00000606668 112 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 MIR4791-201ENST00000607666 84 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 AC067863.3-201ENST00000624172 122 ntBASIC0.63□□□□□ -2.31
LRIT3Q3SXY7 MIR1-1-201ENST00000362147 71 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 SNORD42.2-201ENST00000365570 69 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.419-201ENST00000384041 102 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 RNU6-763P-201ENST00000390865 106 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 HSPE1P25-201ENST00000455484 251 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 MRPS35P2-201ENST00000508242 191 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 SNORA40.15-201ENST00000516884 107 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.376-201ENST00000365638 108 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 RNU6-514P-201ENST00000384208 107 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 RNU6-823P-201ENST00000391042 103 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.645-201ENST00000391229 102 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 MIR1252-201ENST00000408861 65 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 MIR1912-201ENST00000410389 80 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 TRBVB-201ENST00000477100 408 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 AC098869.1-201ENST00000481627 292 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 COX6CP6-201ENST00000490840 228 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 RNU6-988P-201ENST00000519081 107 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 AP000753.3-201ENST00000604083 169 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 RAC1P9-201ENST00000604990 392 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 AC243994.1-201ENST00000618627 109 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 MTND1P7-201ENST00000632801 297 ntBASIC0.61□□□□□ -2.31
LRIT3Q3SXY7 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 MIR367-201ENST00000362299 68 ntBASIC0.6□□□□□ -2.31
LRIT3Q3SXY7 Y_RNA.31-201ENST00000362574 102 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms