Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC109810.1-201ENST00000534066 224 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AC131055.1-201ENST00000584626 316 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AL049861.1-201ENST00000603130 150 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-94P-201ENST00000607728 107 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 AC007742.2-201ENST00000618226 398 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 MIR6513-201ENST00000621188 64 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-674P-201ENST00000363831 107 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 RNU4-10P-201ENST00000364383 140 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.581-201ENST00000391017 97 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 BTF3P11-201ENST00000426582 477 ntBASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.79□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 RNA5SP48-201ENST00000363969 126 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-290P-201ENST00000365212 101 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.455-201ENST00000384230 98 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 SNORD89-201ENST00000390981 114 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 MIR936-201ENST00000401264 98 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 RNU6-197P-201ENST00000516680 100 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 SCARNA24.2-201ENST00000516968 130 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 AC020661.2-201ENST00000560114 134 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 AC113195.1-201ENST00000579952 141 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 AC087685.1-201ENST00000587507 141 ntBASIC0.78□□□□□ -2.28
SHROOM1Q2M3G4 Y_RNA.158-201ENST00000363651 101 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 AC006461.1-201ENST00000412637 326 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-1153P-201ENST00000516760 105 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 RNU2-31P-201ENST00000516954 155 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 MIR4680-201ENST00000580906 66 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 AC013791.1-201ENST00000616619 62 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 MIR6516-201ENST00000630554 81 ntBASIC0.77□□□□□ -2.29
SHROOM1Q2M3G4 SNORA25.1-201ENST00000362326 128 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-514P-201ENST00000384208 107 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.604-201ENST00000410574 102 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 AC091959.1-201ENST00000495857 238 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 RNU7-25P-201ENST00000516544 62 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 MIR5692C2-201ENST00000577959 77 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 7SK.10-201ENST00000621414 298 ntBASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.153-201ENST00000363615 91 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.380-201ENST00000365663 111 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 SNORA51.10-201ENST00000384418 136 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 SNORA2B-201ENST00000384583 137 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 RNU7-149P-201ENST00000516739 59 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 AP003733.2-201ENST00000529409 171 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 MIR548AO-201ENST00000579992 96 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 MIR4791-201ENST00000607666 84 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 snoU18.1-201ENST00000629629 71 ntBASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
SHROOM1Q2M3G4 MIR367-201ENST00000362299 68 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-1272P-201ENST00000362776 107 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-797P-201ENST00000363101 109 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 SNORA53-201ENST00000391141 249 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-994P-201ENST00000410507 111 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AL392103.1-201ENST00000447000 198 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AC023449.1-201ENST00000454464 154 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU4-57P-201ENST00000515980 135 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-830P-201ENST00000516353 107 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-570P-201ENST00000517051 105 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AP003484.1-201ENST00000530974 250 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AL356055.1-201ENST00000602528 446 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AC037487.3-201ENST00000606668 112 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AC006441.5-201ENST00000612680 209 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 AC022140.2-201ENST00000623500 188 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 MTND1P7-201ENST00000632801 297 ntBASIC0.74□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-144P-201ENST00000383951 107 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 MIR193B-201ENST00000384907 83 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 MIR4711-201ENST00000578274 70 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 MIR4724-201ENST00000579485 89 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AL355297.3-201ENST00000604082 446 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 AL008718.3-201ENST00000610217 321 ntBASIC0.73□□□□□ -2.29
SHROOM1Q2M3G4 uc_338.4-201ENST00000616635 176 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms