Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 AC106754.2-201ENST00000623006 233 ntBASIC2.54□□□□□ -2
RAB3GAP1Q15042 AC022513.1-201ENST00000624512 117 ntBASIC2.54□□□□□ -2
RAB3GAP1Q15042 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB3GAP1Q15042 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RAB3GAP1Q15042 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAB3GAP1Q15042 Y_RNA.163-201ENST00000363702 113 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 SNORD14E-201ENST00000364009 85 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 Y_RNA.348-201ENST00000365403 103 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 RNU6-905P-201ENST00000384434 107 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 MIR764-201ENST00000390811 85 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 SNORA48.3-201ENST00000391081 134 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 AL591806.2-201ENST00000433122 173 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.53□□□□□ -2
RAB3GAP1Q15042 RNY4P20-201ENST00000516678 93 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 SNORD36C-201ENST00000516733 66 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 RNU6-537P-201ENST00000517277 103 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
RAB3GAP1Q15042 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB3GAP1Q15042 RNU6-766P-201ENST00000362478 107 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 RNU6-640P-201ENST00000363693 105 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 SNORD115-28-201ENST00000363931 81 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.198-201ENST00000364013 98 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 MT-TI-201ENST00000387365 69 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 MIR802-201ENST00000390235 94 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 SNORD45.4-201ENST00000516629 73 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 MIR4769-201ENST00000584126 77 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
RAB3GAP1Q15042 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 RNU6-1084P-201ENST00000362498 107 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 snoU2-30.1-201ENST00000365012 70 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.440-201ENST00000384120 114 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 RNY4P30-201ENST00000410216 95 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 HMGN2P38-201ENST00000423806 265 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 snoU13.23-201ENST00000458863 104 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 RNU7-26P-201ENST00000458980 63 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 AC002984.1-201ENST00000591692 448 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 RNU6-94P-201ENST00000607728 107 ntBASIC2.51□□□□□ -2.01
RAB3GAP1Q15042 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 SNORA63.5-201ENST00000363548 123 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.323-201ENST00000365157 109 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU6-690P-201ENST00000365242 106 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU6-1014P-201ENST00000383940 103 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU6-756P-201ENST00000383997 107 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 AL445646.1-201ENST00000431784 216 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 HMGN2P32-201ENST00000444648 269 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU6-237P-201ENST00000515985 71 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.5□□□□□ -2.01
RAB3GAP1Q15042 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.336-201ENST00000365307 109 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.362-201ENST00000365518 110 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 RNA5SP109-201ENST00000391010 116 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 RNA5SP482-201ENST00000391269 118 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 AC245047.3-201ENST00000429428 127 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 RPL39P34-201ENST00000477141 156 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 RNU6-830P-201ENST00000516353 107 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 AC015712.3-201ENST00000559380 164 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 MIR4448-201ENST00000584360 86 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 AP001318.4-201ENST00000616637 121 ntBASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RAB3GAP1Q15042 SNORA51.5-201ENST00000384126 131 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 SNORA51.10-201ENST00000384418 136 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 MIR1302-5-201ENST00000408164 150 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 AC108210.2-201ENST00000503681 201 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 MIR5694-201ENST00000581190 76 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAB3GAP1Q15042 AL589743.1-201ENST00000551932 2712 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 RNY4P6-201ENST00000363667 96 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 Y_RNA.298-201ENST00000364960 107 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 RNY1P6-201ENST00000384193 109 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 RNU4-52P-201ENST00000384209 138 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 MIR524-201ENST00000385242 87 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 SUMO2P16-201ENST00000519475 264 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 AC021443.1-201ENST00000604478 211 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAB3GAP1Q15042 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
RAB3GAP1Q15042 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 MIRLET7C-201ENST00000362160 84 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 Y_RNA.49-201ENST00000362714 112 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 RNU6-23P-201ENST00000363283 107 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 Y_RNA.265-201ENST00000364677 108 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 RNU6-1104P-201ENST00000384723 104 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 RNU7-28P-201ENST00000516759 62 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 RNU6-1116P-201ENST00000517269 99 ntBASIC2.46□□□□□ -2.02
RAB3GAP1Q15042 AP003484.1-201ENST00000530974 250 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms