Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR4703-201ENST00000577728 79 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 U2.17-201ENST00000611454 95 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 AL512427.1-201ENST00000618593 349 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 AC069503.3-201ENST00000618674 145 ntBASIC-1.4□□□□□ -2.63
HMGXB3Q12766 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.41□□□□□ -2.64
HMGXB3Q12766 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.41□□□□□ -2.64
HMGXB3Q12766 RNU4-55P-201ENST00000410731 137 ntBASIC-1.41□□□□□ -2.64
HMGXB3Q12766 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.41□□□□□ -2.64
HMGXB3Q12766 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.41□□□□□ -2.64
HMGXB3Q12766 AP000676.1-201ENST00000533307 52 ntBASIC-1.41□□□□□ -2.64
HMGXB3Q12766 AC104010.1-201ENST00000616889 150 ntBASIC-1.41□□□□□ -2.64
HMGXB3Q12766 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU4-66P-201ENST00000365199 138 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU6-533P-201ENST00000384144 107 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU6-606P-201ENST00000384721 111 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNA5SP475-201ENST00000410568 110 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU7-74P-201ENST00000459104 62 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 AC107027.2-201ENST00000512197 115 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 AC011603.4-201ENST00000611325 277 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 AL121895.2-201ENST00000619558 447 ntBASIC-1.42□□□□□ -2.64
HMGXB3Q12766 RNU4-58P-201ENST00000363192 141 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 MIR521-1-201ENST00000384902 87 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 HLA-S-202ENST00000425174 53 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.43□□□□□ -2.64
HMGXB3Q12766 FCF1P4-201ENST00000448326 183 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 RNU6-410P-201ENST00000517006 107 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 AC004223.4-201ENST00000612426 332 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 AC009878.1-201ENST00000621819 340 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 AL391262.2-201ENST00000622466 494 ntBASIC-1.43□□□□□ -2.64
HMGXB3Q12766 MIR20A-201ENST00000362279 71 ntBASIC-1.44□□□□□ -2.64
HMGXB3Q12766 SNORD116.1-201ENST00000365628 92 ntBASIC-1.44□□□□□ -2.64
HMGXB3Q12766 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.44□□□□□ -2.64
HMGXB3Q12766 MTND3P8-201ENST00000412909 339 ntBASIC-1.44□□□□□ -2.64
HMGXB3Q12766 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.44□□□□□ -2.64
HMGXB3Q12766 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.44□□□□□ -2.64
HMGXB3Q12766 RNU6-456P-201ENST00000384493 107 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 AL603910.2-201ENST00000407268 136 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 RNU6-325P-201ENST00000411132 105 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 AC141846.1-201ENST00000568348 142 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 MIR4473-201ENST00000583731 91 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 SNORA69-201ENST00000383895 132 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 MTND3P1-201ENST00000441336 220 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 RNU6-531P-201ENST00000516694 104 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 MIR3920-201ENST00000581751 86 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 JPX_2.1-201ENST00000614161 69 ntBASIC-1.45□□□□□ -2.64
HMGXB3Q12766 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 RNU6-108P-201ENST00000365558 107 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 RNU6-601P-201ENST00000384540 107 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 SNORD54-201ENST00000459159 67 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 snoU83B.1-201ENST00000517136 88 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 AL137161.1-201ENST00000532231 390 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.46□□□□□ -2.64
HMGXB3Q12766 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.46□□□□□ -2.64
HMGXB3Q12766 YWHAEP2-201ENST00000580066 112 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 AC092807.2-201ENST00000609367 243 ntBASIC-1.46□□□□□ -2.64
HMGXB3Q12766 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 SNORD77.3-201ENST00000391113 65 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 RNU2-9P-201ENST00000410194 145 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.47□□□□□ -2.64
HMGXB3Q12766 snoU13.13-201ENST00000458842 104 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 RPS29P24-201ENST00000486345 171 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 AC104576.1-201ENST00000524225 88 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 MIR6854-201ENST00000614935 69 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 AC027807.2-201ENST00000616099 408 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 MIR3674-201ENST00000636576 68 ntBASIC-1.47□□□□□ -2.64
HMGXB3Q12766 RNU6-973P-201ENST00000364690 107 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 RNU6-449P-201ENST00000383914 107 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 RNU6-767P-201ENST00000384132 107 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 SNORA27-201ENST00000384323 126 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 MIR1-2-201ENST00000384961 85 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 GPR143P-201ENST00000434155 205 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 AC093423.1-201ENST00000440817 142 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 SNORA40.17-201ENST00000517256 115 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 AC134698.4-201ENST00000523451 826 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 AP003733.2-201ENST00000529409 171 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 MIR5188-201ENST00000583467 113 ntBASIC-1.48□□□□□ -2.65
HMGXB3Q12766 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 RNU4-28P-201ENST00000364739 141 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 RNU6-154P-201ENST00000384306 106 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 SNORD72-201ENST00000390994 80 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 SNORA26.6-201ENST00000391256 115 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 MTCO1P29-201ENST00000496868 288 ntBASIC-1.49□□□□□ -2.65
HMGXB3Q12766 SERF1AP1-201ENST00000514575 187 ntBASIC-1.49□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms