Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RNU7-87P-201ENST00000459343 62 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 RNU6-436P-201ENST00000516171 114 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 SNORD38.3-201ENST00000516599 73 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 DEFB131E-201ENST00000532329 154 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 AC127455.1-201ENST00000565496 145 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 MIR3913-1-201ENST00000577744 102 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 MIR4280-201ENST00000582178 76 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 AC245884.10-201ENST00000597355 337 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 AC124303.1-201ENST00000605703 360 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 AC004223.4-201ENST00000612426 332 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 MIR6717-201ENST00000622747 73 ntBASIC-1.2□□□□□ -2.6
SSBP1Q04837 RNU6-653P-201ENST00000363074 106 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 SNORD114-25-201ENST00000363742 72 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 RNU6-961P-201ENST00000363893 105 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 SNORA72.3-201ENST00000365074 132 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 MIR513B-201ENST00000385136 84 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 MIR190B-201ENST00000401119 79 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 AL593851.1-201ENST00000426171 157 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 AL009048.1-201ENST00000450437 298 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.21□□□□□ -2.6
SSBP1Q04837 MTND3P7-201ENST00000474435 343 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 AC083904.1-201ENST00000487828 231 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.21□□□□□ -2.6
SSBP1Q04837 RNU6-175P-201ENST00000516896 107 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 MIR4273-201ENST00000582824 84 ntBASIC-1.21□□□□□ -2.6
SSBP1Q04837 RNU6-901P-201ENST00000384593 106 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 MIR626-201ENST00000385032 94 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
SSBP1Q04837 SNORD12B-201ENST00000410433 91 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 RNU7-45P-201ENST00000459460 63 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 MTND2P31-201ENST00000512602 616 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 RNU6-138P-201ENST00000515952 107 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 SNORD36C-201ENST00000516733 66 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.22□□□□□ -2.6
SSBP1Q04837 AP003461.1-201ENST00000528866 78 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.22□□□□□ -2.6
SSBP1Q04837 MIR2681-201ENST00000581814 105 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 AC060780.3-201ENST00000589464 80 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 AC073648.5-201ENST00000603502 305 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 AC124312.5-201ENST00000604451 268 ntBASIC-1.22□□□□□ -2.6
SSBP1Q04837 RNU6-874P-201ENST00000362390 105 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 RNU4-50P-201ENST00000364361 141 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 RNU6-306P-201ENST00000384617 107 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 MIR181B2-201ENST00000385004 89 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 MIR122-201ENST00000385044 85 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 MTND2P9-201ENST00000422293 931 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 RNU6-758P-201ENST00000516292 89 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 RNU7-115P-201ENST00000516433 55 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.23□□□□□ -2.61
SSBP1Q04837 AC108676.2-201ENST00000605225 163 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 MIR6851-201ENST00000617060 67 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 AC022960.3-201ENST00000619794 441 ntBASIC-1.23□□□□□ -2.61
SSBP1Q04837 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 RNU4-58P-201ENST00000363192 141 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 RNU6-721P-201ENST00000410155 105 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.24□□□□□ -2.61
SSBP1Q04837 AL353193.1-201ENST00000421444 268 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 FCF1P4-201ENST00000448326 183 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 RNU6-998P-201ENST00000515894 101 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 AL158050.2-201ENST00000605336 568 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 AC007494.3-201ENST00000624660 743 ntBASIC-1.24□□□□□ -2.61
SSBP1Q04837 RNU6-522P-201ENST00000364497 107 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 MIR539-201ENST00000365690 78 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.25□□□□□ -2.61
SSBP1Q04837 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.25□□□□□ -2.61
SSBP1Q04837 RNU7-96P-201ENST00000459535 64 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 RNU6-155P-201ENST00000516347 100 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 IGKV1-22-201ENST00000524313 326 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 AC018462.2-201ENST00000605375 395 ntBASIC-1.25□□□□□ -2.61
SSBP1Q04837 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 AL590004.1-201ENST00000405321 300 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MTND3P16-201ENST00000452205 344 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 AL500527.2-201ENST00000454105 95 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.26□□□□□ -2.61
SSBP1Q04837 MIR5701-3-201ENST00000578890 82 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MIR5701-1-201ENST00000585138 82 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 AC022441.3-201ENST00000605737 136 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 AC122108.2-201ENST00000611946 526 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MIR5701-2-201ENST00000615634 82 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MIR548AY-201ENST00000617669 107 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 uc_338.10-201ENST00000621872 182 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MTND5P18-201ENST00000445624 1801 ntBASIC-1.26□□□□□ -2.61
SSBP1Q04837 MIR342-201ENST00000362212 99 ntBASIC-1.27□□□□□ -2.61
SSBP1Q04837 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.27□□□□□ -2.61
SSBP1Q04837 SNORD114-29-201ENST00000364819 70 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms