Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPS29P24-201ENST00000486345 171 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 RNU7-116P-201ENST00000516940 62 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 MIR5188-201ENST00000583467 113 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 AC018462.2-201ENST00000605375 395 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 AC092954.2-201ENST00000609103 430 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.52□□□□□ -2.65
HIST1H1AQ02539 RNA5SP403-201ENST00000363598 108 ntBASIC-1.53□□□□□ -2.65
HIST1H1AQ02539 SNORA40.3-201ENST00000390964 122 ntBASIC-1.53□□□□□ -2.65
HIST1H1AQ02539 MIR548O-201ENST00000408583 114 ntBASIC-1.53□□□□□ -2.65
HIST1H1AQ02539 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.53□□□□□ -2.65
HIST1H1AQ02539 AC004467.1-201ENST00000615678 330 ntBASIC-1.53□□□□□ -2.65
HIST1H1AQ02539 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 RNU6-702P-201ENST00000364982 107 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 RNU6-128P-201ENST00000383976 107 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 SNORA27-201ENST00000384323 126 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 SNORA13-201ENST00000458790 133 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 HAR1A.1-201ENST00000459583 118 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 SNORA18.6-201ENST00000516792 115 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 AC141846.1-201ENST00000568348 142 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 MIR4280-201ENST00000582178 76 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 AC124312.5-201ENST00000604451 268 ntBASIC-1.54□□□□□ -2.66
HIST1H1AQ02539 RNU6-879P-201ENST00000364328 108 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 MIR517A-201ENST00000385001 87 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 MIR548I3-201ENST00000408378 149 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 MTATP6P13-201ENST00000438531 667 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 MIR378F-201ENST00000578143 78 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 AC245884.10-201ENST00000597355 337 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 AL354950.2-201ENST00000617939 290 ntBASIC-1.55□□□□□ -2.66
HIST1H1AQ02539 RNU6-595P-201ENST00000363944 107 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 SNORD56B-201ENST00000384713 71 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 MIR181B2-201ENST00000385004 89 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 RNU4-55P-201ENST00000410731 137 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 MTND3P21-201ENST00000433774 331 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 RNA5SP470-201ENST00000516463 106 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 RNY1P9-201ENST00000532431 109 ntBASIC-1.56□□□□□ -2.66
HIST1H1AQ02539 SNORD113-6-201ENST00000363345 75 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 RNU6-949P-201ENST00000384040 107 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 RNU6-38P-201ENST00000384085 107 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 SNORD77.3-201ENST00000391113 65 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 RNU6-938P-201ENST00000411285 103 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 snoU109.3-201ENST00000459477 145 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 MIR2681-201ENST00000581814 105 ntBASIC-1.57□□□□□ -2.66
HIST1H1AQ02539 MIR409-201ENST00000362237 79 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-502P-201ENST00000362419 108 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-597P-201ENST00000365620 102 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-901P-201ENST00000384593 106 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-721P-201ENST00000410155 105 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 MTND1P11-201ENST00000456661 876 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 SNORD38.3-201ENST00000516599 73 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-531P-201ENST00000516694 104 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 MIR3165-201ENST00000579874 75 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 AP003357.1-201ENST00000604497 148 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 RNU6-86P-201ENST00000606534 107 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 MIR6851-201ENST00000617060 67 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 MIR6717-201ENST00000622747 73 ntBASIC-1.58□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 RNA5SP192-201ENST00000364404 120 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 RNU4-16P-201ENST00000364737 141 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 RNU6-95P-201ENST00000384697 107 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 DEFB131E-201ENST00000532329 154 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 ELOCP32-201ENST00000548625 324 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 AC055872.1-201ENST00000570978 278 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 AL158050.2-201ENST00000605336 568 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 uc_338.10-201ENST00000621872 182 ntBASIC-1.59□□□□□ -2.66
HIST1H1AQ02539 RNU6-653P-201ENST00000363074 106 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 SNORD115-28-201ENST00000363931 81 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 RNU4-66P-201ENST00000365199 138 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 RNU6-318P-201ENST00000384283 103 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 RNU6-297P-201ENST00000384636 107 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 MIR1278-201ENST00000408753 81 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 RN7SKP19-201ENST00000516016 252 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 RNU6-175P-201ENST00000516896 107 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 AC018638.8-201ENST00000588755 281 ntBASIC-1.6□□□□□ -2.67
HIST1H1AQ02539 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.61□□□□□ -2.67
HIST1H1AQ02539 SNORD114-29-201ENST00000364819 70 ntBASIC-1.61□□□□□ -2.67
HIST1H1AQ02539 RNU6-900P-201ENST00000384498 102 ntBASIC-1.61□□□□□ -2.67
HIST1H1AQ02539 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.61□□□□□ -2.67
HIST1H1AQ02539 SNORD37.1-201ENST00000390968 65 ntBASIC-1.61□□□□□ -2.67
HIST1H1AQ02539 SNORA26.6-201ENST00000391256 115 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms