Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
E2F1Q01094 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 snoU13.31-201ENST00000607291 104 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 AL513423.1-201ENST00000621695 132 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 MIR6844-201ENST00000637122 62 ntBASIC1.84□□□□□ -2.11
E2F1Q01094 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
E2F1Q01094 AL442644.1-201ENST00000454390 3105 ntBASIC1.84□□□□□ -2.12
E2F1Q01094 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
E2F1Q01094 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
E2F1Q01094 RNU6-888P-201ENST00000363010 101 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 RNU6-268P-201ENST00000364174 107 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 SNORD61-201ENST00000384252 73 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 Y_RNA.488-201ENST00000384403 102 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 SNORA22C-201ENST00000384614 134 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 MIR548A2-201ENST00000384956 97 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
E2F1Q01094 SNORA75.5-201ENST00000391291 81 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 SNRPGP13-201ENST00000442212 177 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 MIR548X2-201ENST00000579776 100 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
E2F1Q01094 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
E2F1Q01094 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.82□□□□□ -2.12
E2F1Q01094 MIR337-201ENST00000362281 93 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 SNORA25.7-201ENST00000364375 127 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 RNU6-1082P-201ENST00000364574 107 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 Y_RNA.261-201ENST00000364631 102 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 SNORD50.2-201ENST00000365465 70 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 MIR569-201ENST00000385228 96 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 MIR660-201ENST00000385235 97 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 MIR613-201ENST00000385248 95 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 SNORD37.2-201ENST00000391075 66 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 AC112693.2-201ENST00000556538 232 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
E2F1Q01094 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
E2F1Q01094 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
E2F1Q01094 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
E2F1Q01094 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
E2F1Q01094 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
E2F1Q01094 RNU6-199P-201ENST00000362954 107 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 Y_RNA.81-201ENST00000362997 102 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 Y_RNA.218-201ENST00000364218 104 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 MIR518F-201ENST00000384973 87 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 MIR891A-201ENST00000401237 79 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 PGBD4P5-201ENST00000445958 426 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 RNU6-1270P-201ENST00000517128 108 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 MIR4781-201ENST00000585250 76 ntBASIC1.81□□□□□ -2.12
E2F1Q01094 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
E2F1Q01094 MIR424-201ENST00000362227 98 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU6-1336P-201ENST00000383886 109 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU6-22P-201ENST00000384355 107 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 Y_RNA.542-201ENST00000384641 111 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 Y_RNA.586-201ENST00000391146 98 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 MIR548O-201ENST00000408583 114 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU6-588P-201ENST00000410281 105 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.8□□□□□ -2.12
E2F1Q01094 RNU7-197P-201ENST00000458836 62 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU7-12P-201ENST00000516030 62 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU6-693P-201ENST00000516134 107 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 RNU6-426P-201ENST00000516464 97 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 AC090142.3-201ENST00000519012 385 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
E2F1Q01094 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
E2F1Q01094 Y_RNA.226-201ENST00000364337 114 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 Y_RNA.343-201ENST00000365354 112 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 SNORA1-201ENST00000384107 130 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 SNORD20-201ENST00000384550 80 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 Y_RNA.525-201ENST00000384570 113 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 RNU6-959P-201ENST00000384671 107 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 MIR513C-201ENST00000401352 84 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 RNU6-257P-201ENST00000410238 98 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 SNORA25.12-201ENST00000516202 82 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 RNU7-25P-201ENST00000516544 62 ntBASIC1.79□□□□□ -2.12
E2F1Q01094 AL391516.1-201ENST00000554380 2449 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
E2F1Q01094 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
E2F1Q01094 Y_RNA.251-201ENST00000364551 99 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 Y_RNA.547-201ENST00000384654 119 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 SNORA20-201ENST00000384662 132 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 Y_RNA.568-201ENST00000384742 113 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 MIR194-1-201ENST00000384892 85 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
E2F1Q01094 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 AC092991.1-201ENST00000477176 376 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.78□□□□□ -2.12
E2F1Q01094 RNU6-250P-201ENST00000516958 103 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 MIR4299-201ENST00000577899 72 ntBASIC1.78□□□□□ -2.12
E2F1Q01094 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms