Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNORA26.5-201ENST00000391215 123 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 RNU6-847P-201ENST00000411115 108 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.31□□□□□ -2.36
CCNA1P78396 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
CCNA1P78396 SNORD19B-201ENST00000459623 84 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 SNORA40.14-201ENST00000516543 86 ntBASIC0.31□□□□□ -2.36
CCNA1P78396 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.31□□□□□ -2.36
CCNA1P78396 RNU4-50P-201ENST00000364361 141 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 SNORD63-201ENST00000384262 68 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 RNU6-308P-201ENST00000390957 107 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 MIR548O-201ENST00000408583 114 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 AC090844.1-201ENST00000422019 156 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 HMGN1P33-201ENST00000432945 451 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 U8.20-201ENST00000459445 131 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 RNU2-13P-201ENST00000515909 113 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 MIR4264-201ENST00000583520 66 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 UBE2V2P2-201ENST00000587677 504 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 PART1_1.1-201ENST00000611761 217 ntBASIC0.3□□□□□ -2.36
CCNA1P78396 Y_RNA.252-201ENST00000364556 101 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU6-934P-201ENST00000365154 107 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU6-580P-201ENST00000365159 107 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU1-115P-201ENST00000365329 160 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU6-130P-201ENST00000411112 103 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU7-62P-201ENST00000458856 62 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 RNU6-1007P-201ENST00000516586 107 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.29□□□□□ -2.36
CCNA1P78396 MIR3612-201ENST00000579753 87 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 uc_338.6-201ENST00000613544 171 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 uc_338.4-201ENST00000616635 176 ntBASIC0.29□□□□□ -2.36
CCNA1P78396 MIR18A-201ENST00000362310 71 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 Y_RNA.5-201ENST00000362334 102 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 Y_RNA.70-201ENST00000362886 110 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 RNU6-1283P-201ENST00000365314 105 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 Y_RNA.547-201ENST00000384654 119 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 AC040926.1-201ENST00000530195 238 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 LARP7P1-201ENST00000605576 316 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 AL162730.1-201ENST00000605734 292 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 AC134878.1-201ENST00000619901 243 ntBASIC0.28□□□□□ -2.36
CCNA1P78396 MIRLET7D-201ENST00000362263 87 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 SNORA72.1-201ENST00000363485 129 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 Y_RNA.241-201ENST00000364470 117 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 Y_RNA.242-201ENST00000364473 110 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 Y_RNA.418-201ENST00000384029 102 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 Y_RNA.526-201ENST00000384572 110 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 BTF3P11-201ENST00000426582 477 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.27□□□□□ -2.37
CCNA1P78396 AC091959.1-201ENST00000495857 238 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 RNU6-976P-201ENST00000516086 111 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 RNU6-191P-201ENST00000516295 94 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 SNORA18.4-201ENST00000516440 124 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 RNU6-1046P-201ENST00000516538 107 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 Y_RNA.713-201ENST00000517013 96 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 MIR4804-201ENST00000581683 73 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 MIR4676-201ENST00000583078 72 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 AC020891.4-201ENST00000605745 93 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 SNORD113-5-201ENST00000607261 78 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 AC006157.1-201ENST00000611750 366 ntBASIC0.27□□□□□ -2.37
CCNA1P78396 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.26□□□□□ -2.37
CCNA1P78396 Y_RNA.58-201ENST00000362807 102 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNA5SP62-201ENST00000363457 110 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 Y_RNA.154-201ENST00000363624 102 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNU6-1205P-201ENST00000363625 106 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNY3P1-201ENST00000365085 102 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 Y_RNA.494-201ENST00000384432 111 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNU6-102P-201ENST00000384485 104 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 Y_RNA.529-201ENST00000384586 119 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNU6-763P-201ENST00000390865 106 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 RNU6-383P-201ENST00000410864 94 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 AC236972.2-201ENST00000434979 310 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 SEPT14P8-201ENST00000508026 178 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.26□□□□□ -2.37
CCNA1P78396 AC010332.2-201ENST00000613083 1904 ntBASIC0.26□□□□□ -2.37
CCNA1P78396 SNORD113-8-201ENST00000363497 74 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 RNU6-899P-201ENST00000363947 107 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 Y_RNA.315-201ENST00000365117 102 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 Y_RNA.356-201ENST00000365475 113 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 RNU6-1248P-201ENST00000391096 64 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 Y_RNA.602-201ENST00000410535 92 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
CCNA1P78396 RNU7-67P-201ENST00000459003 62 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 snoU13.16-201ENST00000459350 104 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 MRPS35P2-201ENST00000508242 191 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 RNU6-1170P-201ENST00000515974 106 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 RNU7-149P-201ENST00000516739 59 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.25□□□□□ -2.37
CCNA1P78396 AL049861.1-201ENST00000603130 150 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 AC007485.1-201ENST00000616755 206 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 AC022140.2-201ENST00000623500 188 ntBASIC0.25□□□□□ -2.37
CCNA1P78396 Y_RNA.280-201ENST00000364765 112 ntBASIC0.24□□□□□ -2.37
CCNA1P78396 SNORA24-201ENST00000384096 131 ntBASIC0.24□□□□□ -2.37
CCNA1P78396 AC023449.1-201ENST00000454464 154 ntBASIC0.24□□□□□ -2.37
CCNA1P78396 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.24□□□□□ -2.37
CCNA1P78396 AC107297.1-201ENST00000459991 176 ntBASIC0.24□□□□□ -2.37
CCNA1P78396 Y_RNA.666-201ENST00000516187 112 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms